RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 VPS16Q9H269 839 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 CFLARO15519 480 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 SKIP12755 728 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 PCYT1AP49585 367 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 CCDC157Q569K6 752 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 SPZ1Q9BXG8 430 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 C14orf93Q9H972 538 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 HADHAP40939 763 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 TFCP2Q12800 502 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 KIAA2013Q8IYS2 634 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-217ENST00000399641 DYTNA2CJ06 578 aa12.15□□□□□ -0.47
CACNA1C-217ENST00000399641 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.47
CACNA1C-217ENST00000399641 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.47
CACNA1C-217ENST00000399641 NCLNQ969V3 563 aa12.15□□□□□ -0.47
CACNA1C-217ENST00000399641 IFNKQ9P0W0 207 aa12.15□□□□□ -0.47
CACNA1C-217ENST00000399641 TRAF5O00463 557 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 GRK2P25098 689 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 MRPL28Q13084 256 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 BBOF1Q8ND07 529 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 HOXC9P31274 260 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TJAP1Q5JTD0 557 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 SCINQ9Y6U3 715 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 SERPINB2P05120 415 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 AKIRIN2Q53H80 203 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 NANOGNBQ7Z5D8 188 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 FAN1Q9Y2M0 1017 aa12.14□□□□□ -0.47
CACNA1C-217ENST00000399641 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 IFNB1P01574 187 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 EVCP57679 992 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 FLT4P35916 1363 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 EVI5O60447 810 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 A1BGP04217 495 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF174Q15697 407 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PHLDB3Q6NSJ2 640 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PLEKHM3Q6ZWE6 761 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 SV2BQ7L1I2 683 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 SSH1Q8WYL5 1049 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 BRF1Q92994 677 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 MRPL11Q9Y3B7 192 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 ADCY7P51828 1080 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PPP1R14AQ96A00 147 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 TNNC2P02585 160 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 RAD18Q9NS91 495 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
CACNA1C-217ENST00000399641 PRR23D1E9PI22 279 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 PRR23D2P0DMB1 279 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 ZNF18P17022 549 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 TNNI1P19237 187 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
CACNA1C-217ENST00000399641 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms