RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 BUB1BO60566 1050 aaPredicted RBP12□□□□□ -0.49
CACNA1C-216ENST00000399638 DIAPH2O60879 1101 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 TBRG4Q969Z0 631 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1C-216ENST00000399638 HDAC11Q96DB2 347 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 PDCD2Q16342 344 aaPredicted RBP12□□□□□ -0.49
CACNA1C-216ENST00000399638 CPLX4Q7Z7G2 160 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
CACNA1C-216ENST00000399638 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 RLBP1P12271 317 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 OSTNP61366 133 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 SPTLC2O15270 562 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 CTSWP56202 376 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 KARSQ15046 597 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 HPDP32754 393 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 NOP14P78316 857 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 COG7P83436 770 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 ERO1AQ96HE7 468 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 GUCA1BQ9UMX6 200 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 F8W8V4 182 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 SCHIP1Q9P0W5 487 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 hCG_1642624A0A1W2PR95 340 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 PHEXP78562 749 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 CEP128Q6ZU80 1094 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 MFSD1Q9H3U5 465 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 SLC38A10Q9HBR0 1119 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 DNAI1Q9UI46 699 aa11.99□□□□□ -0.49
CACNA1C-216ENST00000399638 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SIK1P57059 783 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 ARPP21Q9UBL0 812 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 AOX1Q06278 1338 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 H0YCG3 227 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 KRT86O43790 486 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 FAM95CA0A1B0GW59 222 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 CTAGE15A4D2H0 777 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 DEXIO95424 95 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 CTAGE8P0CG41 777 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 ATP11AP98196 1134 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 CTAGE4Q8IX94 777 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 PPFIA2O75334 1257 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 HADHQ16836 314 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 GCKRQ14397 625 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 RSRC1Q96IZ7 334 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 IWS1Q96ST2 819 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SLC13A4Q9UKG4 626 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
CACNA1C-216ENST00000399638 SOX5P35711 763 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ECE1P42892 770 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 KRT3P12035 628 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ADAT2Q7Z6V5 191 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 AOPEPQ8N6M6 819 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 STK38LQ9Y2H1 464 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 F13A1P00488 732 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 OCM2P0CE71 109 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 LMNB1P20700 586 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 CIITAP33076 1130 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 CABP7Q86V35 215 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 PPFIBP2Q8ND30 876 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 C1orf112Q9NSG2 853 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 HACD3Q9P035 362 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 XDHP47989 1333 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms