RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ALX1Q15699 326 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 NEDD1Q8NHV4 660 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 SNIP1Q8TAD8 396 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 USP6NLQ92738 828 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 MKL1Q969V6 931 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 MTMR4Q9NYA4 1195 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
SMIM11A-201ENST00000399292 MGAMO43451 1857 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 SLC15A5A6NIM6 579 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 AXIN1O15169 862 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 TTLL1O95922 423 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 FGAP02671 866 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 SMCPP49901 116 aaPredicted RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 MFAP1P55081 439 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 NMIQ13287 307 aaPredicted RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 PLS1Q14651 629 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 TRIB2Q92519 343 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 CEP95Q96GE4 821 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 DEFB118Q96PH6 123 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 HMX1Q9NP08 348 aaPredicted RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 ANAPC4Q9UJX5 808 aa13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-201ENST00000399292 RPTORQ8N122 1335 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 STRNO43815 780 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 HSPD1P10809 573 aaKnown RBP13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 CTDSPL2Q05D32 466 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 RETREG3Q86VR2 466 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 MRGPRX2Q96LB1 330 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 MROH8Q9H579 483 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 PAK6Q9NQU5 681 aaPredicted RBP13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 DACH1Q9UI36 760 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 ADAMTS5Q9UNA0 930 aa13.95□□□□□ -0.18
SMIM11A-201ENST00000399292 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 HIP1O00291 1037 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 ZMYND10O75800 440 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 NDUFB10O96000 172 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 ERCC3P19447 782 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 TMEM132BQ14DG7 1078 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 APBA2Q99767 749 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 DIAPH3Q9NSV4 1193 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 FBXO28Q9NVF7 368 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMIM11A-201ENST00000399292 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 VWA5AO00534 786 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 RANBP6O60518 1105 aaKnown RBP13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 SLC25A27O95847 323 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 HOXC6P09630 235 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 FDX1P10109 184 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 SMPD1P17405 629 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 STAT3P40763 770 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 GRB14Q14449 540 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 CCL14Q16627 93 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
SMIM11A-201ENST00000399292 FGRP09769 529 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 WNT7BP56706 349 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 CACNB2Q08289 660 aaPredicted RBP13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 MFSD14CQ5VZR4 134 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 LRRC47Q8N1G4 583 aaKnown RBP13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 GMCL1P1Q8NEA9 526 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 TOMM22Q9NS69 142 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 STX8Q9UNK0 236 aa13.92□□□□□ -0.18
SMIM11A-201ENST00000399292 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 ORC4O43929 436 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 FARP2O94887 1054 aaPredicted RBP13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 FCER1AP12319 257 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 ADORA2AP29274 412 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 UBE2Q1Q7Z7E8 422 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 ABRAQ8N0Z2 381 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
SMIM11A-201ENST00000399292 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms