RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 DMP1Q13316 513 aaPredicted RBP12.67□□□□□ -0.38
HLCS-202ENST00000399120 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
HLCS-202ENST00000399120 KIF22Q14807 665 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 SLFN12Q8IYM2 578 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 PAGR1Q9BTK6 254 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 CPP00450 1065 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 FIS1Q9Y3D6 152 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 H0YIN7 160 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 H2AFZP0C0S5 128 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 TBCCQ15814 346 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 ATG16L1Q676U5 607 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 CSADQ9Y600 493 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 ART3Q13508 389 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 AOC3Q16853 763 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
HLCS-202ENST00000399120 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 SLC4A1P02730 911 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 THOC5Q13769 683 aaKnown RBP12.66□□□□□ -0.38
HLCS-202ENST00000399120 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 SORBS3O60504 671 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 ACTN1P12814 892 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 TMOD1P28289 359 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 TRMT10CQ7L0Y3 403 aaKnown RBP12.66□□□□□ -0.38
HLCS-202ENST00000399120 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLCS-202ENST00000399120 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 IFNAR2P48551 515 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 TFAP4Q01664 338 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
HLCS-202ENST00000399120 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 hCG_1642624A0A1W2PR95 340 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 TECP42680 631 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 DESI2Q9BSY9 194 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
HLCS-202ENST00000399120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLCS-202ENST00000399120 LMCD1Q9NZU5 365 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
HLCS-202ENST00000399120 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 EFCAB8A8MWE9 144 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 MAP3K7O43318 606 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 DLGAP5Q15398 846 aa12.66□□□□□ -0.38
HLCS-202ENST00000399120 GUCY2DQ02846 1103 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 NAA35Q5VZE5 725 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 RSRC2Q7L4I2 434 aaKnown RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 CDC26Q8NHZ8 85 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 GIPC2Q8TF65 315 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 CCT5P48643 541 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 POLGP54098 1239 aaPredicted RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 TTC19Q6DKK2 380 aaPredicted RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 PPP2R2CQ9Y2T4 447 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 MSH2P43246 934 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 PTK2Q05397 1052 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 LPIN2Q92539 896 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 TEKT3Q9BXF9 490 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 BPIFB4P59827 614 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 TUBB6Q9BUF5 446 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
HLCS-202ENST00000399120 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
HLCS-202ENST00000399120 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.39
HLCS-202ENST00000399120 DNAAF3Q8N9W5 541 aa12.65□□□□□ -0.39
HLCS-202ENST00000399120 TRIM15Q9C019 465 aa12.65□□□□□ -0.39
HLCS-202ENST00000399120 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.39
HLCS-202ENST00000399120 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.39
HLCS-202ENST00000399120 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.39
HLCS-202ENST00000399120 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 LRRIQ4A6NIV6 560 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
HLCS-202ENST00000399120 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 FAM47AQ5JRC9 791 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 SPATA5Q8NB90 893 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 CCDC127Q96BQ5 260 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 KIFC3Q9BVG8 833 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 ALAS1P13196 640 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 GNL1P36915 607 aaPredicted RBP12.64□□□□□ -0.39
HLCS-202ENST00000399120 MFAP3P55082 362 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 IFT88Q13099 833 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
HLCS-202ENST00000399120 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
HLCS-202ENST00000399120 NEUROG2Q9H2A3 272 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms