RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TTI2Q6NXR4 508 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 HDXQ7Z353 690 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 LRRC15Q8TF66 581 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 TRIM10Q9UDY6 481 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 MKNK2Q9HBH9 465 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 ABCB6Q9NP58 842 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 GUCA1BQ9UMX6 200 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 PES1O00541 588 aaKnown RBP28.68■■■□□ 2.18
COL13A1-203ENST00000398969 PRPHP41219 470 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 CCDC178Q5BJE1 867 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 NEK11Q8NG66 645 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 SH3RF3Q8TEJ3 882 aaPredicted RBP28.68■■■□□ 2.18
COL13A1-203ENST00000398969 L1RE1Q9UN81 338 aa28.68■■■□□ 2.18
COL13A1-203ENST00000398969 WDR59Q6PJI9 974 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 TXLNBQ8N3L3 684 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 HAUS4Q9H6D7 363 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 TCP11L1Q9NUJ3 509 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 MAGEC2Q9UBF1 373 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-203ENST00000398969 ZBTB22O15209 634 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 TSPY3P0CV98 308 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 TSPY8P0CW00 308 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 VSNL1P62760 191 aa28.67■■■□□ 2.18
COL13A1-203ENST00000398969 NOC3LQ8WTT2 800 aaKnown RBP28.67■■■□□ 2.18
COL13A1-203ENST00000398969 PSMD14O00487 310 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 HMGB2P26583 209 aaKnown RBP28.66■■■□□ 2.18
COL13A1-203ENST00000398969 NCAPH2Q6IBW4 605 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 NOA1Q8NC60 698 aaKnown RBP28.66■■■□□ 2.18
COL13A1-203ENST00000398969 FLT1P17948 1338 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 PALM3A6NDB9 673 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-203ENST00000398969 DNM2P50570 870 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 HERVK_113P62684 666 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 GPS2Q13227 327 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 MCM6Q14566 821 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 CRY2Q49AN0 593 aa28.66■■■□□ 2.18
COL13A1-203ENST00000398969 MSL3Q8N5Y2 521 aaKnown RBP28.66■■■□□ 2.18
COL13A1-203ENST00000398969 DHTKD1Q96HY7 919 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-203ENST00000398969 SRGNP10124 158 aa28.65■■■□□ 2.18
COL13A1-203ENST00000398969 HNRNPH2P55795 449 aaKnown RBP28.65■■■□□ 2.18
COL13A1-203ENST00000398969 TRAPPC11Q7Z392 1133 aa28.65■■■□□ 2.18
COL13A1-203ENST00000398969 DUSP9Q99956 384 aaKnown RBP28.65■■■□□ 2.18
COL13A1-203ENST00000398969 CUEDC2Q9H467 287 aa28.65■■■□□ 2.18
COL13A1-203ENST00000398969 PDE11AQ9HCR9 933 aa28.65■■■□□ 2.18
COL13A1-203ENST00000398969 MTMR7Q9Y216 660 aa28.65■■■□□ 2.18
COL13A1-203ENST00000398969 B4DLN1 442 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 LDHBP07195 334 aaKnown RBP28.64■■■□□ 2.18
COL13A1-203ENST00000398969 TSR1Q2NL82 804 aaKnown RBP28.64■■■□□ 2.18
COL13A1-203ENST00000398969 RPGRQ92834 1020 aaKnown RBP28.64■■■□□ 2.18
COL13A1-203ENST00000398969 TMEM47Q9BQJ4 181 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 SUGCTQ9HAC7 445 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 MAGEF1Q9HAY2 307 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 ANKIB1Q9P2G1 1089 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 PLCG1P19174 1290 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 GYS2P54840 703 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 MEA1Q16626 185 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 CSGALNACT2Q8N6G5 542 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 SLC44A5Q8NCS7 719 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 TUBGCP2Q9BSJ2 902 aa28.64■■■□□ 2.18
COL13A1-203ENST00000398969 TUBBP07437 444 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 SLC51AQ86UW1 340 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 CABP7Q86V35 215 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 ZNF444Q8N0Y2 327 aaPredicted RBP28.63■■■□□ 2.17
COL13A1-203ENST00000398969 TTYH3Q9C0H2 523 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 ADAM21Q9UKJ8 722 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 STX8Q9UNK0 236 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 MYH1P12882 1939 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 PLSCR1O15162 318 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 DDR1Q08345 913 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 AMOTL1Q8IY63 956 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 AK8Q96MA6 479 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 GBP3Q9H0R5 595 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 EXOC1Q9NV70 894 aa28.63■■■□□ 2.17
COL13A1-203ENST00000398969 WDR66Q8TBY9 1149 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 EXOC4Q96A65 974 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 LZTS2Q9BRK4 669 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 ZMYND12Q9H0C1 365 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 LEMD3Q9Y2U8 911 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 OR52Z1P0C646 297 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 GOLGA8HP0CJ92 632 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 DIXDC1Q155Q3 683 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 CCDC122Q5T0U0 273 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 P2RX5Q93086 422 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 TRIM9Q9C026 710 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 TFR2Q9UP52 801 aa28.62■■■□□ 2.17
COL13A1-203ENST00000398969 POLRMTO00411 1230 aaKnown RBP28.61■■■□□ 2.17
COL13A1-203ENST00000398969 CCNE1P24864 410 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 KRT83P78385 493 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 ZNF662Q6ZS27 426 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 TGFBRAP1Q8WUH2 860 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 AGPAT5Q9NUQ2 364 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 NAV1Q8NEY1 1877 aa28.61■■■□□ 2.17
COL13A1-203ENST00000398969 RASSF10A6NK89 507 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 ENC1O14682 589 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 EIF3JO75822 258 aaKnown RBP28.6■■■□□ 2.17
COL13A1-203ENST00000398969 RASA1P20936 1047 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 PSD3Q9NYI0 1048 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 HDAC6Q9UBN7 1215 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 KLRF2D3W0D1 207 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 BAG3O95817 575 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 PDE4DQ08499 809 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 GRIK5Q16478 980 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms