RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 CLK2P49760 499 aaKnown RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 TOB1P50616 345 aaPredicted RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 MRPL12P52815 198 aaKnown RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 HUNKP57058 714 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 CEBPZQ03701 1054 aaKnown RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 FASTKD5Q7L8L6 764 aaKnown RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 KRT25Q7Z3Z0 450 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 REPS2Q8NFH8 660 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 SPATA32Q96LK8 384 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 LMBRD1Q9NUN5 540 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 CCPG1Q9ULG6 757 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 NOL7Q9UMY1 257 aaKnown RBP19.08■□□□□ 0.65
CDH23-204ENST00000398792 CLIC4Q9Y696 253 aa19.08■□□□□ 0.65
CDH23-204ENST00000398792 ELP1O95163 1332 aa19.08■□□□□ 0.64
CDH23-204ENST00000398792 OPLAHO14841 1288 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 PRPF40AO75400 957 aaKnown RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 ZBTB48P10074 688 aaPredicted RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 UBE2SQ16763 222 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 ANO1Q5XXA6 986 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 AGBL1Q96MI9 1066 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 BIN2Q9UBW5 565 aaPredicted RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 CTDP1Q9Y5B0 961 aaPredicted RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 YEATS4O95619 227 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 TRAPPC10P48553 1259 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 NBR1Q14596 966 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 SPRYD7Q5W111 196 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 RAVER2Q9HCJ3 691 aaKnown RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 TMEM260Q9NX78 707 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 HOXC10Q9NYD6 342 aa19.07■□□□□ 0.64
CDH23-204ENST00000398792 MRPL11Q9Y3B7 192 aaKnown RBP19.07■□□□□ 0.64
CDH23-204ENST00000398792 GTF2A2P52657 109 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 OAZ1P54368 228 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 SF3A1Q15459 793 aaKnown RBP19.06■□□□□ 0.64
CDH23-204ENST00000398792 JAKMIP3Q5VZ66 844 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 GPAT2Q6NUI2 795 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 TEX2Q8IWB9 1127 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 CPXCR1Q8N123 301 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 MS4A4AQ96JQ5 239 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 RCOR1Q9UKL0 485 aa19.06■□□□□ 0.64
CDH23-204ENST00000398792 MEIS2O14770 477 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 TOMM70O94826 608 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 CETPP11597 493 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 IRX3P78415 501 aaPredicted RBP19.05■□□□□ 0.64
CDH23-204ENST00000398792 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
CDH23-204ENST00000398792 PABPC4Q13310 644 aaKnown RBP eCLIP19.05■□□□□ 0.64
CDH23-204ENST00000398792 NONOQ15233 471 aaKnown RBP eCLIP19.05■□□□□ 0.64
CDH23-204ENST00000398792 USP17L6PQ6QN14 398 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 LINC00301Q8NCQ3 95 aa19.05■□□□□ 0.64
CDH23-204ENST00000398792 ZNF214Q9UL59 606 aaPredicted RBP19.05■□□□□ 0.64
CDH23-204ENST00000398792 SMCHD1A6NHR9 2005 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 PIK3CDO00329 1044 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 WNT7AO00755 349 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 AP3B2Q13367 1082 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 STK38Q15208 465 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 INF2Q27J81 1249 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 TTC38Q5R3I4 469 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 RASAL3Q86YV0 1011 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 ASCC2Q9H1I8 757 aaPredicted RBP19.04■□□□□ 0.64
CDH23-204ENST00000398792 PCDHB6Q9Y5E3 794 aa19.04■□□□□ 0.64
CDH23-204ENST00000398792 CCL15-CCL14A0A0B4J2E2 113 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 PTPAQ15257 358 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 CCL15Q16663 113 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 LBX2Q6XYB7 198 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 KCNG4Q8TDN1 519 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 PGBD1Q96JS3 809 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.03■□□□□ 0.64
CDH23-204ENST00000398792 TLL2Q9Y6L7 1015 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 ALAS1P13196 640 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 SLC39A14Q15043 492 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 MCTP2Q6DN12 878 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
CDH23-204ENST00000398792 MB21D1Q8N884 522 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 CLEC4DQ8WXI8 215 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 BRI3BPQ8WY22 251 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 TEX13BQ9BXU2 312 aa19.03■□□□□ 0.64
CDH23-204ENST00000398792 SPTLC2O15270 562 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 GADD45BO75293 160 aaPredicted RBP19.02■□□□□ 0.64
CDH23-204ENST00000398792 OSBPP22059 807 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 HERVK_113P62684 666 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 RGMBQ6NW40 437 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 POTEEQ6S8J3 1075 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 NEK8Q86SG6 692 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 TBCKQ8TEA7 893 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
CDH23-204ENST00000398792 ANO3Q9BYT9 981 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 SLC45A1Q9Y2W3 748 aa19.02■□□□□ 0.64
CDH23-204ENST00000398792 GCOM1H8Y6P7 765 aaPredicted RBP19.01■□□□□ 0.63
CDH23-204ENST00000398792 NFIBO00712 420 aa19.01■□□□□ 0.63
CDH23-204ENST00000398792 CFBP00751 764 aa19.01■□□□□ 0.63
CDH23-204ENST00000398792 POLR2MP0CAP2 368 aa19.01■□□□□ 0.63
CDH23-204ENST00000398792 YY1P25490 414 aa19.01■□□□□ 0.63
CDH23-204ENST00000398792 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
CDH23-204ENST00000398792 ZNF157P51786 506 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms