RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 PRKAG2Q9UGJ0 569 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 EYSQ5T1H1 3165 aa11.71□□□□□ -0.54
NIFKP1-201ENST00000398317 CUL9Q8IWT3 2517 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 PGK1P00558 417 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 COPS2P61201 443 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 KCTD2Q14681 263 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 ZNF444Q8N0Y2 327 aaPredicted RBP11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 LENG1Q96BZ8 264 aaPredicted RBP11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
NIFKP1-201ENST00000398317 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 IGKV6D-41A0A0C4DH26 115 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 ZFYP08048 801 aaPredicted RBP11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 ZNF865P0CJ78 1059 aaPredicted RBP11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 RARBP10826 455 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 IFNL3Q8IZI9 196 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 CPXCR1Q8N123 301 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 BADQ92934 168 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 MTRQ99707 1265 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
NIFKP1-201ENST00000398317 CDH23Q9H251 3354 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 GNAT2P19087 354 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 COPB2P35606 906 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 TLE2Q04725 743 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 SNX17Q15036 470 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 MTMR4Q9NYA4 1195 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
NIFKP1-201ENST00000398317 DLL1O00548 723 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 ZBED4O75132 1171 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 AKR1A1P14550 325 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 SHHQ15465 462 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 C9orf50Q5SZB4 431 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 RNF180Q86T96 592 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 MKL1Q969V6 931 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 CNPY2Q9Y2B0 182 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 STXBP5LQ9Y2K9 1186 aa11.67□□□□□ -0.54
NIFKP1-201ENST00000398317 TTC41PQ6P2S7 1318 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 DNAJC25-GNG10A0A024R161 153 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 A0A1W2PQ45 241 aaPredicted RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 A0A1W2PQY0 241 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 ERC2O15083 957 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 TTLL1O95922 423 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 TSPY3P0CV98 308 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 TSPY8P0CW00 308 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 ITGB8P26012 769 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 TFAP4Q01664 338 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 LRRFIP1Q32MZ4 808 aaKnown RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 ZMYM1Q5SVZ6 1142 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 SLFN13Q68D06 897 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 NACAP1Q9BZK3 213 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 NAPBQ9H115 298 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 INCENPQ9NQS7 918 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 FEM1BQ9UK73 627 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 MYO9BQ13459 2157 aa11.66□□□□□ -0.54
NIFKP1-201ENST00000398317 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 ADAMTS4O75173 837 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 BMP3P12645 472 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 KCNC4Q03721 635 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 PDE4BQ07343 736 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 PPARAQ07869 468 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 BLOC1S3Q6QNY0 202 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms