RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 IPPQ9Y573 584 aa2.59□□□□□ -1.99
HMGN2P39-201ENST00000398005 PCDHGC4Q9Y5F7 938 aa2.59□□□□□ -1.99
HMGN2P39-201ENST00000398005 CSADQ9Y600 493 aa2.59□□□□□ -1.99
HMGN2P39-201ENST00000398005 CNTNAP5Q8WYK1 1306 aa2.59□□□□□ -2
HMGN2P39-201ENST00000398005 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ABHD14A-ACY1A0A1B0GW23 586 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 KLRG2A4D1S0 409 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SPDYE3A6NKU9 549 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 DCDC2CA8MYV0 355 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 C9IYK1 514 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 PRRT4C9JH25 899 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 EFSO43281 561 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 DLX3O60479 287 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CTNND1O60716 968 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ADAM23O75077 832 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CLEC3AO75596 197 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CRTAMO95727 393 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 PROCP04070 461 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ASGR2P07307 311 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SNRPB2P08579 225 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 FAM163BP0C2L3 166 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 MAPTP10636 758 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SELPP16109 830 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CD33P20138 364 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CDC25BP30305 580 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 GRIK1P39086 918 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ADCYAP1R1P41586 468 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 IREB2P48200 963 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 RENBPP51606 427 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 AK2P54819 239 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 GJA9P57773 515 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 POU5F1Q01860 360 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 OCRLQ01968 901 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SRSF11Q05519 484 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 LAMC2Q13753 1193 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TRIM14Q14142 442 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SIM2Q14190 667 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 GALEQ14376 348 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 PDE3AQ14432 1141 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ACAP2Q15057 778 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TMEM201Q5SNT2 666 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TMEM240Q5SV17 173 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 DCAF15Q66K64 600 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 POMZP3Q6PJE2 187 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 RIPOR1Q6ZS17 1223 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 USP53Q70EK8 1073 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 MAMDC2Q7Z304 686 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 C12orf40Q86WS4 652 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ANKLE2Q86XL3 938 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TMEM192Q8IY95 271 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CBARPQ8N350 705 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CRACR2BQ8N4Y2 399 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 C1orf162Q8NEQ5 155 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ADCY4Q8NFM4 1077 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 POF1BQ8WVV4 589 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CCT6BQ92526 530 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SMARCC1Q92922 1105 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ACSF2Q96CM8 615 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TRMT2BQ96GJ1 504 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 FAXDC2Q96IV6 333 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 MPP4Q96JB8 637 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 AIFM3Q96NN9 605 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 NAP1L5Q96NT1 182 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 UBE2OQ9C0C9 1292 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 MKRN2Q9H000 416 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SLC12A5Q9H2X9 1139 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 CABP5Q9NP86 173 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 NMRK2Q9NPI5 230 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 C1orf112Q9NSG2 853 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 C14orf119Q9NWQ9 140 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 THG1LQ9NWX6 298 aaKnown RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 GTF2IRD1Q9UHL9 959 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 FBXO2Q9UK22 296 aaPredicted RBP2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ADAM30Q9UKF2 790 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 HDAC9Q9UKV0 1011 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 SOX13Q9UN79 622 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 INVSQ9Y283 1065 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 ZNF652Q9Y2D9 606 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 DYRK1BQ9Y463 629 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TRAF6Q9Y4K3 522 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHA9Q9Y5H5 950 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 TACC3Q9Y6A5 838 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 DGKBQ9Y6T7 804 aa2.58□□□□□ -2
HMGN2P39-201ENST00000398005 A0A087WZG4 1122 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.57□□□□□ -2
HMGN2P39-201ENST00000398005 KLHL33A6NCF5 533 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 ZBTB42B2RXF5 422 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 H3BRJ5 948 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 AQP7O14520 342 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 MSTNO14793 375 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 RGS13O14921 159 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 ANP32CO43423 234 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 CBFA2T2O43439 604 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 EPB41L2O43491 1005 aaKnown RBP2.57□□□□□ -2
HMGN2P39-201ENST00000398005 AP1G1O43747 822 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 PQBP1O60828 265 aaKnown RBP2.57□□□□□ -2
HMGN2P39-201ENST00000398005 OFD1O75665 1012 aa2.57□□□□□ -2
HMGN2P39-201ENST00000398005 RNASEH2AO75792 299 aaKnown RBP2.57□□□□□ -2
HMGN2P39-201ENST00000398005 GLRX3O76003 335 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms