RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ANKRD20A12PQ8NF67 263 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TBCKQ8TEA7 893 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CCDC12Q8WUD4 166 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SRRTQ9BXP5 876 aaKnown RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TMEM260Q9NX78 707 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 FEZ2Q9UHY8 353 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 UBR3Q6ZT12 1888 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 LAD1O00515 517 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 GNA11P29992 359 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 UBXN1Q04323 297 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 AFF2P51816 1311 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 PRPHP41219 470 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 NEK8Q86SG6 692 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SLF2Q8IX21 1173 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TBC1D22AQ8WUA7 517 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ABHD10Q9NUJ1 306 aa20.61■□□□□ 0.89
CHRFAM7A-202ENST00000397827 PES1O00541 588 aaKnown RBP20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TPM1P09493 284 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CLCN6P51797 869 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ERVK-24P63145 666 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ACRBPQ8NEB7 543 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MXD3Q9BW11 206 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MRFAP1Q9Y605 127 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 H7C1D1 291 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 PDHBP11177 359 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 COA7Q96BR5 231 aa20.6■□□□□ 0.89
CHRFAM7A-202ENST00000397827 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KCNB1Q14721 858 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ST7Q9NRC1 585 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 EFCAB8A8MWE9 144 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 RHOBTB3O94955 611 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ABL1P00519 1130 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 AKR1B1P15121 316 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 DDX4Q9NQI0 724 aaKnown RBP20.59■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KRT9P35527 623 aa20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TNNT3P45378 269 aaPredicted RBP20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 HNRNPH2P55795 449 aaKnown RBP20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 PPP2R3AQ06190 1150 aa20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 REXO1Q8N1G1 1221 aaKnown RBP20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 GIMAP8Q8ND71 665 aaPredicted RBP20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MTMR4Q9NYA4 1195 aa20.58■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CCDC51Q96ER9 411 aa20.58■□□□□ 0.88
CHRFAM7A-202ENST00000397827 PSMA7O14818 248 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TXKP42681 527 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CERS5Q8N5B7 392 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 AK8Q96MA6 479 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CRAMP1Q96RY5 1269 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 RIOX1Q9H6W3 641 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 GPCPD1Q9NPB8 672 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 PPEF1O14829 653 aaPredicted RBP20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ONECUT3O60422 494 aaPredicted RBP20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TRIM9Q9C026 710 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 NOVP48745 357 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 PDE4DQ08499 809 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 STIM1Q13586 685 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 HPS3Q969F9 1004 aa20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MMTAG2Q9BU76 263 aaKnown RBP20.57■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MYL1P05976 194 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 FCER1AP12319 257 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 FECHP22830 423 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SCNN1DP51172 638 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 STK4Q13043 487 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ZNF569Q5MCW4 686 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TTI2Q6NXR4 508 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TMTC1Q8IUR5 882 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CHP1Q99653 195 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 KIF5CO60282 957 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TRIM37O94972 964 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ASIC1P78348 528 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 GABPAQ06546 454 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 DOK7Q18PE1 504 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TEX35Q5T0J7 233 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MB21D1Q8N884 522 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ZSWIM4Q9H7M6 989 aa20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TTF2Q9UNY4 1162 aaKnown RBP20.56■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TTC26A0AVF1 554 aa20.55■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CSGALNACT2Q8N6G5 542 aa20.55■□□□□ 0.88
CHRFAM7A-202ENST00000397827 DUSP9Q99956 384 aaKnown RBP20.55■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLF1Q9BQI6 1058 aa20.55■□□□□ 0.88
CHRFAM7A-202ENST00000397827 LGALS16A8MUM7 142 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TDP2O95551 362 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CYP26C1Q6V0L0 522 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 EXOC1Q9NV70 894 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLC37A4O43826 429 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 THAP9Q9H5L6 903 aa20.54■□□□□ 0.88
CHRFAM7A-202ENST00000397827 B4DLN1 442 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 EEF1GP26641 437 aaKnown RBP20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 RAD51AP2Q09MP3 1159 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TRIM14Q14142 442 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ZNF507Q8TCN5 953 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ZC3H12CQ9C0D7 883 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms