RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PPP6R2O75170 966 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 FLOT1O75955 427 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 ICAM1P05362 532 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 CHADLQ6NUI6 762 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 CATSPERGQ6ZRH7 1159 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 PROCA1Q8NCQ7 364 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 OTUD5Q96G74 571 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 GBA2Q9HCG7 927 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-205ENST00000397761 PNMA2Q9UL42 364 aa22.27■■□□□ 1.16
PDLIM2-205ENST00000397761 ABCB11O95342 1321 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L15C9J2P7 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L13C9JLJ4 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L11C9JVI0 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L18D6R9N7 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L22D6RA61 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L17D6RBQ6 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L19D6RCP7 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L20D6RJB6 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 PIK3CDO00329 1044 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 WNT7AO00755 349 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 BMP15O95972 392 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 DSG3P32926 999 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L24Q0WX57 530 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 NONOQ15233 471 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 TTC38Q5R3I4 469 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 MCTP2Q6DN12 878 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 BIN2Q9UBW5 565 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 PCDHA7Q9UN72 937 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 CEP131Q9UPN4 1083 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 CEP350Q5VT06 3117 aa22.26■■□□□ 1.15
PDLIM2-205ENST00000397761 VWA5AO00534 786 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 MEIS2O14770 477 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 HSPA6P17066 643 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 HOXA7P31268 230 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 COG2Q14746 738 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 USH1GQ495M9 461 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 AXDND1Q5T1B0 1012 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 ADALQ6DHV7 355 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 CCDC174Q6PII3 467 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 JMYQ8N9B5 988 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 REPS2Q8NFH8 660 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 OPTNQ96CV9 577 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 TMEM260Q9NX78 707 aa22.25■■□□□ 1.15
PDLIM2-205ENST00000397761 A0A1W2PQ27 194 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 A0A1W2PQ64 194 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 A0A1W2PQD8 194 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 ME1P48163 572 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 MOGSQ13724 837 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 INF2Q27J81 1249 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 JAKMIP3Q5VZ66 844 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 ZNF408Q9H9D4 720 aa22.24■■□□□ 1.15
PDLIM2-205ENST00000397761 GJA5P36382 358 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 OAZ1P54368 228 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 GHRHRQ02643 423 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 FSTL1Q12841 308 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 AP3B2Q13367 1082 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 ATG4CQ96DT6 458 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 SLC10A4Q96EP9 437 aa22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 MRPL11Q9Y3B7 192 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-205ENST00000397761 ATP2A1O14983 1001 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 CELF2O95319 508 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 ORC2Q13416 577 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 UBE2SQ16763 222 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 TREML2Q5T2D2 321 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 C2orf69Q8N8R5 385 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 GOLGA6L4A6NEF3 574 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 ZBED4O75132 1171 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 TAL1P17542 331 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 ATP2B1P20020 1258 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 PTPREP23469 700 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 ATP2C1P98194 919 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 CST9Q5W186 159 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 USP17L6PQ6QN14 398 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 NEK8Q86SG6 692 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 SMC1BQ8NDV3 1235 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 TBCKQ8TEA7 893 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 AGBL1Q96MI9 1066 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 HOXC10Q9NYD6 342 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 CCPG1Q9ULG6 757 aa22.22■■□□□ 1.15
PDLIM2-205ENST00000397761 SPDYE16A6NNV3 312 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 EDIL3O43854 480 aa22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 FOSP01100 380 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 MARCKSP29966 332 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 C4orf32Q8N8J7 132 aa22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 CRYGNQ8WXF5 182 aa22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 FBXO2Q9UK22 296 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 AGTPBP1Q9UPW5 1226 aa22.21■■□□□ 1.15
PDLIM2-205ENST00000397761 CUTAO60888 179 aa22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 ZNF174Q15697 407 aa22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 SAMD1Q6SPF0 538 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 LBX2Q6XYB7 198 aa22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 FASTKD5Q7L8L6 764 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 KRI1Q8N9T8 703 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 P2RX7Q99572 595 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 ZNF214Q9UL59 606 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 SRPRBQ9Y5M8 271 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-205ENST00000397761 PASKQ96RG2 1323 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 PTGDRQ13258 359 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms