RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 HOMER2Q9NSB8 354 aa17.88■□□□□ 0.45
SEC13-206ENST00000397102 ARIH1Q9Y4X5 557 aaPredicted RBP17.88■□□□□ 0.45
SEC13-206ENST00000397102 CHD7Q9P2D1 2997 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 SOWAHBA6NEL2 793 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 PFKMP08237 780 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
SEC13-206ENST00000397102 SKIV2LQ15477 1246 aaKnown RBP17.87■□□□□ 0.45
SEC13-206ENST00000397102 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 VWCEQ96DN2 955 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 A1CFQ9NQ94 594 aaKnown RBP17.87■□□□□ 0.45
SEC13-206ENST00000397102 Q9Y3F1 56 aa17.87■□□□□ 0.45
SEC13-206ENST00000397102 PRRC2BQ5JSZ5 2229 aaKnown RBP17.86■□□□□ 0.45
SEC13-206ENST00000397102 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 DYNC1LI2O43237 492 aaPredicted RBP17.86■□□□□ 0.45
SEC13-206ENST00000397102 GTPBP6O43824 516 aaPredicted RBP17.86■□□□□ 0.45
SEC13-206ENST00000397102 BMP3P12645 472 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 SMPD1P17405 629 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 SCLYQ96I15 445 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 ZNF287Q9HBT7 754 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 RNF146Q9NTX7 359 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 COG6Q9Y2V7 657 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 MTCH2Q9Y6C9 303 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 SCN5AQ14524 2016 aa17.86■□□□□ 0.45
SEC13-206ENST00000397102 TTLL1O95922 423 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 LCTP09848 1927 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 PSMC6P62333 389 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 TMEM67Q5HYA8 995 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 SLFN13Q68D06 897 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 IQSEC1Q6DN90 963 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 ZNF444Q8N0Y2 327 aaPredicted RBP17.85■□□□□ 0.45
SEC13-206ENST00000397102 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
SEC13-206ENST00000397102 ALDH8A1Q9H2A2 487 aaPredicted RBP17.85■□□□□ 0.45
SEC13-206ENST00000397102 COG5Q9UP83 839 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 HCN4Q9Y3Q4 1203 aa17.85■□□□□ 0.45
SEC13-206ENST00000397102 PLIN4Q96Q06 1357 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 ZNF536O15090 1300 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 CA3P07451 260 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 PTGS1P23219 599 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 STAT2P52630 851 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 TTLL4Q14679 1199 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 TAPT1Q6NXT6 567 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 LRFN3Q9BTN0 628 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 PDGFCQ9NRA1 345 aa17.84■□□□□ 0.45
SEC13-206ENST00000397102 RFXAPO00287 272 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 PRDM1O75626 825 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 SUPT20HL2P0C7V6 817 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 FBXO16Q8IX29 292 aaPredicted RBP17.83■□□□□ 0.44
SEC13-206ENST00000397102 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 TRERF1Q96PN7 1200 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 EPHX3Q9H6B9 360 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 TANC1Q9C0D5 1861 aa17.83■□□□□ 0.44
SEC13-206ENST00000397102 REV3LO60673 3130 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 ACTN1P12814 892 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 SLC9A7Q96T83 725 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
SEC13-206ENST00000397102 VTA1Q9NP79 307 aa17.82■□□□□ 0.44
SEC13-206ENST00000397102 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
SEC13-206ENST00000397102 TNKSO95271 1327 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 TLL1O43897 1013 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 CYP2C9P11712 490 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 ALAS1P13196 640 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 TDO2P48775 406 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 DEFB128Q7Z7B8 93 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 NEDD1Q8NHV4 660 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 PHOSPHO2Q8TCD6 241 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 MORC4Q8TE76 937 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 APPBP2Q92624 585 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 OSBP2Q969R2 916 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 CERS4Q9HA82 394 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 TRMT13Q9NUP7 481 aaKnown RBP17.81■□□□□ 0.44
SEC13-206ENST00000397102 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 CYP39A1Q9NYL5 469 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
SEC13-206ENST00000397102 XIRP2A4UGR9 3374 aa17.81■□□□□ 0.44
SEC13-206ENST00000397102 COL4A4P53420 1690 aaPredicted RBP17.8■□□□□ 0.44
SEC13-206ENST00000397102 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 PLA2G6O60733 806 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 TSPY3P0CV98 308 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 TSPY8P0CW00 308 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 MS4A1P11836 297 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 GNAT2P19087 354 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 RFC2P35250 354 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 IKQ13123 557 aaPredicted RBP17.8■□□□□ 0.44
SEC13-206ENST00000397102 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 TMEM31Q5JXX7 168 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 ZBTB40Q9NUA8 1239 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms