RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 VTA1Q9NP79 307 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 GPCPD1Q9NPB8 672 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 IL17RBQ9NRM6 502 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 TCP11L1Q9NUJ3 509 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 RLFQ13129 1914 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 RAD50Q92878 1312 aa19.25■□□□□ 0.67
DDR1-229ENST00000396342 RANBP2P49792 3224 aaKnown RBP19.24■□□□□ 0.67
DDR1-229ENST00000396342 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
DDR1-229ENST00000396342 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
DDR1-229ENST00000396342 NMIQ13287 307 aaPredicted RBP19.24■□□□□ 0.67
DDR1-229ENST00000396342 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
DDR1-229ENST00000396342 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
DDR1-229ENST00000396342 CYP39A1Q9NYL5 469 aa19.24■□□□□ 0.67
DDR1-229ENST00000396342 TMEM265A0A087WTH1 108 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 DYNC1LI2O43237 492 aaPredicted RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 SNAP25P60880 206 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 HAND2P61296 217 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 FSCN1Q16658 493 aaKnown RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 GPATCH4Q5T3I0 446 aaKnown RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 MFSD5Q6N075 450 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 KIAA1211Q6ZU35 1233 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 TMEM47Q9BQJ4 181 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 Q9Y3F1 56 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 FRMPD2Q68DX3 1309 aaPredicted RBP19.23■□□□□ 0.67
DDR1-229ENST00000396342 SALL3Q9BXA9 1300 aa19.23■□□□□ 0.67
DDR1-229ENST00000396342 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 FGRP09769 529 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 SLC16A2P36021 539 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 PDE4DQ08499 809 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 PSRC1Q6PGN9 363 aaPredicted RBP19.22■□□□□ 0.67
DDR1-229ENST00000396342 EEPD1Q7L9B9 569 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 CHD1LQ86WJ1 897 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
DDR1-229ENST00000396342 ZNF536O15090 1300 aa19.22■□□□□ 0.67
DDR1-229ENST00000396342 SOWAHBA6NEL2 793 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
DDR1-229ENST00000396342 SDSP20132 328 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 BEX3Q00994 111 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 CCSAPQ6IQ19 270 aaPredicted RBP19.21■□□□□ 0.67
DDR1-229ENST00000396342 BTNL9Q6UXG8 535 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 POLR3EQ9NVU0 708 aa19.21■□□□□ 0.67
DDR1-229ENST00000396342 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 CALML3P27482 149 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 CPT1AP50416 773 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
DDR1-229ENST00000396342 IMMTQ16891 758 aaKnown RBP19.2■□□□□ 0.66
DDR1-229ENST00000396342 MUM1L1Q5H9M0 696 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 RNF207Q6ZRF8 634 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 FBXO16Q8IX29 292 aaPredicted RBP19.2■□□□□ 0.66
DDR1-229ENST00000396342 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 SEMA6BQ9H3T3 888 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 FRMPD3Q5JV73 1810 aa19.2■□□□□ 0.66
DDR1-229ENST00000396342 SUPT20HL2P0C7V6 817 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 FOSL2P15408 326 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 CDK7P50613 346 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 DGKHQ86XP1 1220 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 FGD4Q96M96 766 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 CDX2Q99626 313 aaPredicted RBP19.19■□□□□ 0.66
DDR1-229ENST00000396342 TBX21Q9UL17 535 aa19.19■□□□□ 0.66
DDR1-229ENST00000396342 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
DDR1-229ENST00000396342 FOXP2O15409 715 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 PDHBP11177 359 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 NOVP48745 357 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
DDR1-229ENST00000396342 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.18■□□□□ 0.66
DDR1-229ENST00000396342 SMC5Q8IY18 1101 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 RPUSD2Q8IZ73 545 aaKnown RBP19.18■□□□□ 0.66
DDR1-229ENST00000396342 GUCD1Q96NT3 240 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 UBAC1Q9BSL1 405 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 WDR11Q9BZH6 1224 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 KRT23Q9C075 422 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 HIPK3Q9H422 1215 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 CNNM2Q9H8M5 875 aa19.18■□□□□ 0.66
DDR1-229ENST00000396342 COL11A1P12107 1806 aaPredicted RBP19.17■□□□□ 0.66
DDR1-229ENST00000396342 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.17■□□□□ 0.66
DDR1-229ENST00000396342 NKRFO15226 690 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDR1-229ENST00000396342 KPNA6O60684 536 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 SMPD1P17405 629 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 ALDH5A1P51649 535 aaPredicted RBP19.17■□□□□ 0.66
DDR1-229ENST00000396342 NKX3-2P78367 333 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 ZNF543Q08ER8 600 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 PPP2R5BQ15173 497 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 DUSP28Q4G0W2 176 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 ZNF589Q86UQ0 364 aaPredicted RBP19.17■□□□□ 0.66
DDR1-229ENST00000396342 MCF2L2Q86YR7 1114 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 DNERQ8NFT8 737 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
DDR1-229ENST00000396342 MAF1Q9H063 256 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 KATNBL1Q9H079 304 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 MSRAQ9UJ68 235 aa19.17■□□□□ 0.66
DDR1-229ENST00000396342 GNEQ9Y223 722 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms