RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 ICAM1P05362 532 aa26.07■■□□□ 1.76
PARD6B-202ENST00000396039 PWP2Q15269 919 aaKnown RBP26.07■■□□□ 1.76
PARD6B-202ENST00000396039 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.07■■□□□ 1.76
PARD6B-202ENST00000396039 CDX2Q99626 313 aaPredicted RBP26.07■■□□□ 1.76
PARD6B-202ENST00000396039 TCP11L1Q9NUJ3 509 aa26.07■■□□□ 1.76
PARD6B-202ENST00000396039 ADD3Q9UEY8 706 aaKnown RBP26.07■■□□□ 1.76
PARD6B-202ENST00000396039 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.06■■□□□ 1.76
PARD6B-202ENST00000396039 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.06■■□□□ 1.76
PARD6B-202ENST00000396039 SOWAHBA6NEL2 793 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 NMT2O60551 498 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 TOP1P11387 765 aaKnown RBP26.06■■□□□ 1.76
PARD6B-202ENST00000396039 MFAP1P55081 439 aaKnown RBP26.06■■□□□ 1.76
PARD6B-202ENST00000396039 VPS53Q5VIR6 699 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 TLK2Q86UE8 772 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 TMEM199Q8N511 208 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 AP5M1Q9H0R1 490 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 CYP39A1Q9NYL5 469 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 Q9Y3F1 56 aa26.06■■□□□ 1.76
PARD6B-202ENST00000396039 NT5C2P49902 561 aa26.05■■□□□ 1.76
PARD6B-202ENST00000396039 IQSEC1Q6DN90 963 aa26.05■■□□□ 1.76
PARD6B-202ENST00000396039 BTNL9Q6UXG8 535 aa26.05■■□□□ 1.76
PARD6B-202ENST00000396039 CRBNQ96SW2 442 aa26.05■■□□□ 1.76
PARD6B-202ENST00000396039 RANBP17Q9H2T7 1088 aaKnown RBP26.05■■□□□ 1.76
PARD6B-202ENST00000396039 VTA1Q9NP79 307 aa26.05■■□□□ 1.76
PARD6B-202ENST00000396039 FGAP02671 866 aa26.04■■□□□ 1.76
PARD6B-202ENST00000396039 EPHB4P54760 987 aa26.04■■□□□ 1.76
PARD6B-202ENST00000396039 FAM126BQ8IXS8 530 aa26.04■■□□□ 1.76
PARD6B-202ENST00000396039 GNEQ9Y223 722 aaKnown RBP26.04■■□□□ 1.76
PARD6B-202ENST00000396039 UNC80Q8N2C7 3258 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 LAMA4Q16363 1823 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 CTAGE5O15320 804 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 FSCN1Q16658 493 aaKnown RBP26.03■■□□□ 1.76
PARD6B-202ENST00000396039 RRP12Q5JTH9 1297 aaKnown RBP26.03■■□□□ 1.76
PARD6B-202ENST00000396039 PSRC1Q6PGN9 363 aaPredicted RBP26.03■■□□□ 1.76
PARD6B-202ENST00000396039 NSMFQ6X4W1 530 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 MAFAQ8NHW3 353 aaPredicted RBP26.03■■□□□ 1.76
PARD6B-202ENST00000396039 TTC14Q96N46 770 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 MPHOSPH6Q99547 160 aaKnown RBP26.03■■□□□ 1.76
PARD6B-202ENST00000396039 INCENPQ9NQS7 918 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 MTMR7Q9Y216 660 aa26.03■■□□□ 1.76
PARD6B-202ENST00000396039 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.02■■□□□ 1.76
PARD6B-202ENST00000396039 HSPD1P10809 573 aaKnown RBP26.02■■□□□ 1.76
PARD6B-202ENST00000396039 MUM1L1Q5H9M0 696 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 SYDE2Q5VT97 1194 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 MORC4Q8TE76 937 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 CHMP4CQ96CF2 233 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 FAM227BQ96M60 508 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 TTYH1Q9H313 450 aaPredicted RBP26.02■■□□□ 1.76
PARD6B-202ENST00000396039 RNF41Q9H4P4 317 aaPredicted RBP26.02■■□□□ 1.76
PARD6B-202ENST00000396039 CCDC171Q6TFL3 1326 aa26.02■■□□□ 1.76
PARD6B-202ENST00000396039 A0A0D9SFI3 127 aa26.01■■□□□ 1.75
PARD6B-202ENST00000396039 TRIM6-TRIM34B2RNG4 842 aa26.01■■□□□ 1.75
PARD6B-202ENST00000396039 BEX3Q00994 111 aa26.01■■□□□ 1.75
PARD6B-202ENST00000396039 TMEM47Q9BQJ4 181 aa26.01■■□□□ 1.75
PARD6B-202ENST00000396039 MTIF3Q9H2K0 278 aaKnown RBP26.01■■□□□ 1.75
PARD6B-202ENST00000396039 FOSL2P15408 326 aa26■■□□□ 1.75
PARD6B-202ENST00000396039 DNAJB2P25686 324 aa26■■□□□ 1.75
PARD6B-202ENST00000396039 IRX5P78411 483 aaPredicted RBP26■■□□□ 1.75
PARD6B-202ENST00000396039 CXCL17Q6UXB2 119 aa26■■□□□ 1.75
PARD6B-202ENST00000396039 MFSD6Q6ZSS7 791 aa26■■□□□ 1.75
PARD6B-202ENST00000396039 SLC43A3Q8NBI5 491 aa26■■□□□ 1.75
PARD6B-202ENST00000396039 BUD13Q9BRD0 619 aaKnown RBP eCLIP26■■□□□ 1.753e-21■□□□□ 11.3
PARD6B-202ENST00000396039 ASTN1O14525 1302 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 CD4P01730 458 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 SMPD1P17405 629 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 SNAP25P60880 206 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 AKNAD1Q5T1N1 836 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 TAPT1Q6NXT6 567 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 FBXO16Q8IX29 292 aaPredicted RBP25.99■■□□□ 1.75
PARD6B-202ENST00000396039 MYLIPQ8WY64 445 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 CDH23Q9H251 3354 aa25.99■■□□□ 1.75
PARD6B-202ENST00000396039 WDR19Q8NEZ3 1342 aa25.98■■□□□ 1.75
PARD6B-202ENST00000396039 DYNC1LI2O43237 492 aaPredicted RBP25.98■■□□□ 1.75
PARD6B-202ENST00000396039 PDHBP11177 359 aa25.98■■□□□ 1.75
PARD6B-202ENST00000396039 NMIQ13287 307 aaPredicted RBP25.98■■□□□ 1.75
PARD6B-202ENST00000396039 ITGA7Q13683 1181 aa25.98■■□□□ 1.75
PARD6B-202ENST00000396039 RASGRP2Q7LDG7 609 aa25.98■■□□□ 1.75
PARD6B-202ENST00000396039 RWDD1Q9H446 243 aaPredicted RBP25.98■■□□□ 1.75
PARD6B-202ENST00000396039 B4DLN1 442 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 CSF2RAP15509 400 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 SLC16A2P36021 539 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 ALDH5A1P51649 535 aaPredicted RBP25.97■■□□□ 1.75
PARD6B-202ENST00000396039 MRPL12P52815 198 aaKnown RBP25.97■■□□□ 1.75
PARD6B-202ENST00000396039 DUSP28Q4G0W2 176 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 CCDC178Q5BJE1 867 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 TMEM240Q5SV17 173 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 KIAA1211Q6ZU35 1233 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 EEPD1Q7L9B9 569 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 ZNF589Q86UQ0 364 aaPredicted RBP25.97■■□□□ 1.75
PARD6B-202ENST00000396039 ESR2Q92731 530 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 RILPL2Q969X0 211 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 PPP1R12CQ9BZL4 782 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 LNPKQ9C0E8 428 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 POLR3EQ9NVU0 708 aa25.97■■□□□ 1.75
PARD6B-202ENST00000396039 FRMPD2Q68DX3 1309 aaPredicted RBP25.96■■□□□ 1.75
PARD6B-202ENST00000396039 PTPDC1A2A3K4 754 aa25.96■■□□□ 1.75
PARD6B-202ENST00000396039 BAATQ14032 418 aaPredicted RBP25.96■■□□□ 1.75
PARD6B-202ENST00000396039 GPATCH4Q5T3I0 446 aaKnown RBP25.96■■□□□ 1.75
PARD6B-202ENST00000396039 TTBK2Q6IQ55 1244 aa25.96■■□□□ 1.75
PARD6B-202ENST00000396039 TIFAQ96CG3 184 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms