RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 CFAP45Q9UL16 551 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 M0R2N6 131 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 GJA5P36382 358 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 GNL2Q13823 731 aaKnown RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 GADL1Q6ZQY3 521 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 MOB2Q70IA6 237 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 KIFC2Q96AC6 838 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 PCDHA1Q9Y5I3 950 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 CCL15-CCL14A0A0B4J2E2 113 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 GOLGA6L22H0YM25 854 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 NOGQ13253 232 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CCL15Q16663 113 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 MOXD1Q6UVY6 613 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
CCR9-203ENST00000395963 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 RIOX2Q8IUF8 465 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 REXO1Q8N1G1 1221 aaKnown RBP10.11□□□□□ -0.79
CCR9-203ENST00000395963 VPS54Q9P1Q0 977 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 MORF4L1Q9UBU8 362 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 FZD1Q9UP38 647 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CEP131Q9UPN4 1083 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 ZNF236Q9UL36 1845 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 SMCO2A6NFE2 343 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 SLC16A2P36021 539 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
CCR9-203ENST00000395963 MRE11P49959 708 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CCNA1P78396 465 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 DLK2Q6UY11 383 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CMTR1Q8N1G2 835 aaKnown RBP10.11□□□□□ -0.79
CCR9-203ENST00000395963 CCDC82Q8N4S0 544 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 TNFRSF25Q93038 417 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 CFHR5Q9BXR6 569 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 SCAND2PQ9GZW5 306 aaPredicted RBP10.11□□□□□ -0.79
CCR9-203ENST00000395963 ZDHHC9Q9Y397 364 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 ZNF536O15090 1300 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 ELP1O95163 1332 aa10.11□□□□□ -0.79
CCR9-203ENST00000395963 GCFC2P16383 781 aaKnown RBP10.1□□□□□ -0.79
CCR9-203ENST00000395963 TM4SF4P48230 202 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 HERVK_113P62684 666 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 KRT85P78386 507 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 NPY5RQ15761 445 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 RASGRP2Q7LDG7 609 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 ASCC2Q9H1I8 757 aaPredicted RBP10.1□□□□□ -0.79
CCR9-203ENST00000395963 MROH8Q9H579 483 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 PSTPIP2Q9H939 334 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
CCR9-203ENST00000395963 CCPG1Q9ULG6 757 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 PFASO15067 1338 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 LAD1O00515 517 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 YEATS4O95619 227 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 HSD17B4P51659 736 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
CCR9-203ENST00000395963 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 CCDC194A0A1B0GVG4 234 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 DDX11L8A8MPP1 907 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 FAM155AB1AL88 458 aaPredicted RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 PPP1R11O60927 126 aaPredicted RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 NONOQ15233 471 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCR9-203ENST00000395963 TREML2Q5T2D2 321 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 MYSM1Q5VVJ2 828 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 ABRAQ8N0Z2 381 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 ACAD9Q9H845 621 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 ABT1Q9ULW3 272 aaKnown RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 B4DLN1 442 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 GCOM1H8Y6P7 765 aaPredicted RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 POLR2MP0CAP2 368 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 MAP2K2P36507 400 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 USP11P51784 963 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 FAM110CQ1W6H9 321 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 JMYQ8N9B5 988 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 GPKOWQ92917 476 aaPredicted RBP eCLIP10.09□□□□□ -0.79
CCR9-203ENST00000395963 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
CCR9-203ENST00000395963 AIFM3Q96NN9 605 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
CCR9-203ENST00000395963 BTBD19C9JJ37 291 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 PDHXO00330 501 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 STAM2O75886 525 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 STAT3P40763 770 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 NASPP49321 788 aaPredicted RBP10.08□□□□□ -0.8
CCR9-203ENST00000395963 MCTP1Q6DN14 999 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 MPHOSPH6Q99547 160 aaKnown RBP10.08□□□□□ -0.8
CCR9-203ENST00000395963 RTEL1Q9NZ71 1219 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms