RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
CDRT1-204ENST00000395906 PALM3A6NDB9 673 aaPredicted RBP10.71□□□□□ -0.69
CDRT1-204ENST00000395906 TRAPPC3O43617 180 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 JAK2O60674 1132 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 TMCC1O94876 653 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 A1BGP04217 495 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
CDRT1-204ENST00000395906 PTH1RQ03431 593 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 NECTIN1Q15223 517 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 CMPK2Q5EBM0 449 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 GKAP1Q5VSY0 366 aaPredicted RBP10.71□□□□□ -0.69
CDRT1-204ENST00000395906 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 CD302Q8IX05 232 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 ZNF496Q96IT1 587 aaPredicted RBP10.71□□□□□ -0.69
CDRT1-204ENST00000395906 DHRS1Q96LJ7 313 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 BRD8Q9H0E9 1235 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 TUBE1Q9UJT0 475 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
CDRT1-204ENST00000395906 NCAPD2Q15021 1401 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 CCT8L1PA6NM43 557 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 PSMD14O00487 310 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 FAM200BP0CF97 657 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.7
CDRT1-204ENST00000395906 STAT6P42226 847 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 TUBP50607 506 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 MAP3K12Q12852 859 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 POLA2Q14181 598 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF790Q6PG37 636 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 TMEM110Q86TL2 294 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 OGFOD1Q8N543 542 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.7
CDRT1-204ENST00000395906 ATP6V1G3Q96LB4 118 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 KCNMB3Q9NPA1 279 aa10.71□□□□□ -0.7
CDRT1-204ENST00000395906 PAIP2BQ9ULR5 123 aaKnown RBP10.71□□□□□ -0.7
CDRT1-204ENST00000395906 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 GOLGA6L10A0A0M3HER8 536 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 IPO5O00410 1097 aaKnown RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 FLOT1O75955 427 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 KRT14P02533 472 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 CCDC166P0CW27 439 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 AIMP1Q12904 312 aaKnown RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 CBX3Q13185 183 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 STK3Q13188 491 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 ITGB3BPQ13352 177 aaPredicted RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 QPCTQ16769 361 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 BICDL1Q6ZP65 573 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 SYT15Q9BQS2 421 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 NACA2Q9H009 215 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 SYNPO2Q9UMS6 1093 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 CEP131Q9UPN4 1083 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 ATP8A1Q9Y2Q0 1164 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 SMAPO00193 183 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 TRIM37O94972 964 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 GNAI2P04899 355 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 MYL6BP14649 208 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 POSTNQ15063 836 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 PAPD7Q5XG87 772 aaKnown RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 TBC1D1Q86TI0 1168 aaPredicted RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
CDRT1-204ENST00000395906 VCXQ9H320 206 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 POLD4Q9HCU8 107 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 CIDEBQ9UHD4 219 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 LRRC42Q9Y546 428 aa10.7□□□□□ -0.7
CDRT1-204ENST00000395906 SYNRGQ9UMZ2 1314 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 AHDC1Q5TGY3 1603 aaPredicted RBP10.69□□□□□ -0.7
CDRT1-204ENST00000395906 SP100P23497 879 aaPredicted RBP10.69□□□□□ -0.7
CDRT1-204ENST00000395906 NLRP5P59047 1200 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 CFAP58Q5T655 872 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
CDRT1-204ENST00000395906 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 TRIM68Q6AZZ1 485 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 ATP11CQ8NB49 1132 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 CAGE1Q8TC20 777 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 VCX3BQ9H321 246 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 VCX3AQ9NNX9 186 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 OVOS2A0A0G2JMS6 1433 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF233A6NK53 670 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 EIF4E1BA6NMX2 242 aaKnown RBP10.69□□□□□ -0.7
CDRT1-204ENST00000395906 CAPN15O75808 1086 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 NEXNQ0ZGT2 675 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 OLFML1Q6UWY5 402 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 IQCKQ8N0W5 287 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 MLKLQ8NB16 471 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms