RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 GSDMAQ96QA5 445 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 MMS19Q96T76 1030 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 LSM14BQ9BX40 385 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 HYOU1Q9Y4L1 999 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PALM3A6NDB9 673 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ECM2O94769 699 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 KLHL7Q8IXQ5 586 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 TSC1Q92574 1164 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 DCPSQ96C86 337 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 MRRFQ96E11 262 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 CDHR1Q96JP9 859 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ADD3Q9UEY8 706 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 QRICH2Q9H0J4 1663 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 hCG_1984214I3L0E3 225 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 K7ENM7 598 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 GTPBP6O43824 516 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PPP2R5AQ15172 486 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 XKR9Q5GH70 373 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 FAM173BQ6P4H8 233 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF713Q8N859 430 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 NCAPGQ9BPX3 1015 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SERTAD1Q9UHV2 236 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 GOLGA8KD6RF30 607 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 CYP2J2P51589 502 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ELF2Q15723 593 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ARMCX5Q6P1M9 558 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 CDKL2Q92772 493 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 WDR17Q8IZU2 1322 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 PPFIA4O75335 1185 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 PDE6AP16499 860 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ABCB4P21439 1286 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 STX2P32856 288 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 PRPSAP1Q14558 356 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NAA25Q14CX7 972 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 KLHL14Q9P2G3 628 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 GADD45BO75293 160 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 OATP04181 439 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 RPN1P04843 607 aaKnown RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ICA1Q05084 483 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ARHGEF6Q15052 776 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NLGN1Q8N2Q7 840 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 AMNQ9BXJ7 453 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 WDR70Q9NW82 654 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 FRMPD2Q68DX3 1309 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 TMEM191BP0C7N4 346 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 SEPT14Q6ZU15 432 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 MAP7D3Q8IWC1 876 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CPSF2Q9P2I0 782 aaKnown RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ADAM9Q13443 819 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 EXOC3L4Q17RC7 722 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CEP120Q8N960 986 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 FBXO18Q8NFZ0 1043 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 MED10Q9BTT4 135 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 MED4Q9NPJ6 270 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NRBP2Q9NSY0 501 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 TYW5A2RUC4 315 aaKnown RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ADCY8P40145 1251 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CHRNDQ07001 517 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 SEPT2Q15019 361 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ABCB5Q2M3G0 1257 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ANKARQ7Z5J8 1434 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 PIK3CAP42336 1068 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 STAT2P52630 851 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 OTUD7BQ6GQQ9 843 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 STAP2Q9UGK3 403 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CDC25BP30305 580 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NDUFA8P51970 172 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 GBP7Q8N8V2 638 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 FAM193BQ96PV7 902 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 COPRSQ9NQ92 184 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 ANAPC5Q9UJX4 755 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 EPN1Q9Y6I3 576 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CARMIL3Q8ND23 1372 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 TFDP1Q14186 410 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 LRCH2Q5VUJ6 765 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 RPS6KC1Q96S38 1066 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CCDC68Q9H2F9 335 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 CCPG1Q9ULG6 757 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 PLEKHG1Q9ULL1 1385 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 A6NJR5 290 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 APBA1Q02410 837 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 MRFAP1L1Q96HT8 127 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 TMEM206Q9H813 350 aa5.97□□□□□ -1.45
VPS13C-204ENST00000395898 NLRP1Q9C000 1473 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 A0A0D9SFI3 127 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF233A6NK53 670 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 GAP43P17677 238 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 PDIA3P30101 505 aaKnown RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 PSMC2P35998 433 aaKnown RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 GARSP41250 739 aaKnown RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 TMED8Q6PL24 325 aaPredicted RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 LRRC47Q8N1G4 583 aaKnown RBP5.96□□□□□ -1.45
VPS13C-204ENST00000395898 ATP6V0A1Q93050 837 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 HAUS8Q9BT25 410 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 LOC102724428A0A0B4J2F2 783 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 PTPREP23469 700 aa5.96□□□□□ -1.45
VPS13C-204ENST00000395898 USP14P54578 494 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms