RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 STAM2O75886 525 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 RXRAP19793 462 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ATP2C1P98194 919 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SPATA1Q5VX52 437 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 FLT1P17948 1338 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 FAM13AO94988 1023 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TNNT1P13805 278 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 GAP43P17677 238 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 IRX3P78415 501 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TDRD12Q587J7 1177 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TMCO3Q6UWJ1 677 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SMCR8Q8TEV9 937 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CRACR2AQ9BSW2 395 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TMEM206Q9H813 350 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SPC25Q9HBM1 224 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 PIH1D3Q9NQM4 214 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 PFKFB1P16118 471 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NOLC1Q14978 699 aaKnown RBP eCLIP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TMC6Q7Z403 805 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SELENOOQ9BVL4 669 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 IDI2Q9BXS1 227 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 PLCH1Q4KWH8 1693 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ABCB11O95342 1321 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 BIN1O00499 593 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MUTP22033 750 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 AFMP43652 599 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CTDSPL2Q05D32 466 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 FAM151AQ8WW52 585 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CEP95Q96GE4 821 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SRP68Q9UHB9 627 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TMOD1P28289 359 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CCT6AP40227 531 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 HERC4Q5GLZ8 1057 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CYP26C1Q6V0L0 522 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 MCPH1Q8NEM0 835 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 AZI2Q9H6S1 392 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 DDX25Q9UHL0 483 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF500O60304 480 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SFNP31947 248 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 IREB2P48200 963 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 MB21D1Q8N884 522 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TMEM47Q9BQJ4 181 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 RNF14Q9UBS8 474 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 DIXDC1Q155Q3 683 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 WDR78Q5VTH9 848 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 AOPEPQ8N6M6 819 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 DRC1Q96MC2 740 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 RIOK1Q9BRS2 568 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 OSBPL5Q9H0X9 879 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 HAUS4Q9H6D7 363 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 DISC1Q9NRI5 854 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 MTMR4Q9NYA4 1195 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 NYAP2Q9P242 653 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 KCNB1Q14721 858 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 HACE1Q8IYU2 909 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ARFGAP3Q9NP61 516 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ARMCX3Q9UH62 379 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ARHGEF35A5YM69 484 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CD2BP2O95400 341 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 LINC00116Q8NCU8 138 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SLC7A3Q8WY07 619 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CWC15Q9P013 229 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PSDA5PKW4 1024 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TACC1O75410 805 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 RPLP2P05387 115 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PDE4DQ08499 809 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CROCCP2Q86T23 111 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 MYOCDQ8IZQ8 938 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 OR8K1Q8NGG5 319 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 BTAF1O14981 1849 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CITO14578 2027 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PTPRZ1P23471 2315 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SPTA1P02549 2419 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 USP17L10C9JJH3 530 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 F5H6K3 240 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CFBP00751 764 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 KLRC3Q07444 240 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CTR9Q6PD62 1173 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 FAM178BQ8IXR5 827 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TRIM58Q8NG06 486 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 EDEM3Q9BZQ6 932 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TRAF5O00463 557 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 RFX1P22670 979 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CRKP46108 304 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 NDUFA8P51970 172 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CDC42EP1Q00587 391 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 RESTQ13127 1097 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PI16Q6UXB8 463 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF710Q8N1W2 664 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 C17orf75Q9HAS0 396 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 XIRP1Q702N8 1843 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 KCPQ6ZWJ8 1503 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PVALEFA0A1B0GWK0 134 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 NOP56O00567 594 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SLC8A3P57103 927 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 GRM4Q14833 912 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TCP10Q12799 353 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms