RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 USP17L2Q6R6M4 530 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 PIK3AP1Q6ZUJ8 805 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 WNK4Q96J92 1243 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
RTFDC1-203ENST00000395881 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 PTGDRQ13258 359 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 VGLL4Q14135 290 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 PLA2G4DQ86XP0 818 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.228e-6■■□□□ 13.6
RTFDC1-203ENST00000395881 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 WRNIP1Q96S55 665 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 ZNF341Q9BYN7 854 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 PCDHA6Q9UN73 950 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
RTFDC1-203ENST00000395881 SMTNL1A8MU46 457 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 IKBKBO14920 756 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 INPP5BP32019 993 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 GRIN1Q05586 938 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 DHX40Q8IX18 779 aaKnown RBP16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
RTFDC1-203ENST00000395881 HSPA8P11142 646 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 ZNF75DP51815 510 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 NAPAP54920 295 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 MAP3K10Q02779 954 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 ZNF174Q15697 407 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 CT47A1Q5JQC4 288 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 TMEM179Q6ZVK1 233 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 ACTN4O43707 911 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 ZBTB48P10074 688 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 PRPHP41219 470 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 TM4SF4P48230 202 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 TPM4P67936 248 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 POSTNQ15063 836 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 SPATA20Q8TB22 786 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 CSADQ9Y600 493 aa16.38■□□□□ 0.21
RTFDC1-203ENST00000395881 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 PIGSQ96S52 555 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
RTFDC1-203ENST00000395881 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 WNT7AO00755 349 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 LBX1P52954 281 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 PNOCQ13519 176 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 DACH1Q9UI36 760 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 PCDHA5Q9Y5H7 936 aa16.36■□□□□ 0.21
RTFDC1-203ENST00000395881 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 CA12O43570 354 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 TBC1D12O60347 775 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 TRPA1O75762 1119 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 SMC2O95347 1197 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 MLKLQ8NB16 471 aa16.35■□□□□ 0.21
RTFDC1-203ENST00000395881 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms