RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CLEC4DQ8WXI8 215 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 ZKSCAN3Q9BRR0 538 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 TSEN34Q9BSV6 310 aaKnown RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 GPCPD1Q9NPB8 672 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 ISY1Q9ULR0 285 aaKnown RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 NFIBO00712 420 aa19.05■□□□□ 0.64
CXCL12-206ENST00000395795 TLE2Q04725 743 aa19.05■□□□□ 0.64
CXCL12-206ENST00000395795 TMEM63BQ5T3F8 832 aa19.05■□□□□ 0.64
CXCL12-206ENST00000395795 RNF180Q86T96 592 aa19.05■□□□□ 0.64
CXCL12-206ENST00000395795 CCPG1Q9ULG6 757 aa19.05■□□□□ 0.64
CXCL12-206ENST00000395795 HIP1O00291 1037 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 ZNF213O14771 459 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 KDM4AO75164 1064 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 ACLYP53396 1101 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 GJA9P57773 515 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 KCNA10Q16322 511 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 ESR2Q92731 530 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 CPVLQ9H3G5 476 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 RNF41Q9H4P4 317 aaPredicted RBP19.04■□□□□ 0.64
CXCL12-206ENST00000395795 ZSWIM5Q9P217 1185 aa19.04■□□□□ 0.64
CXCL12-206ENST00000395795 GNEQ9Y223 722 aaKnown RBP19.04■□□□□ 0.64
CXCL12-206ENST00000395795 B4E1Z4 1266 aa19.03■□□□□ 0.64
CXCL12-206ENST00000395795 TAPT1Q6NXT6 567 aa19.03■□□□□ 0.64
CXCL12-206ENST00000395795 ENAHQ8N8S7 591 aaPredicted RBP19.03■□□□□ 0.64
CXCL12-206ENST00000395795 PDGFCQ9NRA1 345 aa19.03■□□□□ 0.64
CXCL12-206ENST00000395795 GOLGA8HP0CJ92 632 aa19.02■□□□□ 0.64
CXCL12-206ENST00000395795 BAATQ14032 418 aaPredicted RBP19.02■□□□□ 0.64
CXCL12-206ENST00000395795 ANKRD33Q7Z3H0 272 aa19.02■□□□□ 0.64
CXCL12-206ENST00000395795 TAF6LQ9Y6J9 622 aa19.02■□□□□ 0.64
CXCL12-206ENST00000395795 MOXD2PA6NHM9 499 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 CHMLP26374 656 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 CDK7P50613 346 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 PTH1RQ03431 593 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 FAAP100Q0VG06 881 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 GPR153Q6NV75 609 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 NSMFQ6X4W1 530 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 BADQ92934 168 aa19.01■□□□□ 0.63
CXCL12-206ENST00000395795 ZSCAN10Q96SZ4 725 aaPredicted RBP19.01■□□□□ 0.63
CXCL12-206ENST00000395795 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 ASB14A6NK59 587 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 KIAA0355O15063 1070 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 ASGR1P07306 291 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 SMPD1P17405 629 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 NT5C2P49902 561 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 EPHB4P54760 987 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 SEC23AQ15436 765 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 C9orf50Q5SZB4 431 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 SLC30A10Q6XR72 485 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 TOX2Q96NM4 488 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 UBA5Q9GZZ9 404 aa19■□□□□ 0.63
CXCL12-206ENST00000395795 C6orf222P0C671 652 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-206ENST00000395795 SLC35G1Q2M3R5 365 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 CYB5R4Q7L1T6 521 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 FBXO16Q8IX29 292 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-206ENST00000395795 PNMA1Q8ND90 353 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-206ENST00000395795 STARD7Q9NQZ5 370 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 ELP1O95163 1332 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 RAD50Q92878 1312 aa18.99■□□□□ 0.63
CXCL12-206ENST00000395795 CLTBP09497 229 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 ALDH5A1P51649 535 aaPredicted RBP18.98■□□□□ 0.63
CXCL12-206ENST00000395795 BEX3Q00994 111 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 TNFAIP2Q03169 654 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 SHHQ15465 462 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 IMMTQ16891 758 aaKnown RBP18.98■□□□□ 0.63
CXCL12-206ENST00000395795 GPATCH4Q5T3I0 446 aaKnown RBP18.98■□□□□ 0.63
CXCL12-206ENST00000395795 Q7L0L9 218 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 LBHD1Q9BQE6 289 aaPredicted RBP18.98■□□□□ 0.63
CXCL12-206ENST00000395795 CTNNA3Q9UI47 895 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 TBX21Q9UL17 535 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 GRIN2DO15399 1336 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 TNKSO95271 1327 aa18.98■□□□□ 0.63
CXCL12-206ENST00000395795 RBM47A0AV96 593 aaKnown RBP18.97■□□□□ 0.63
CXCL12-206ENST00000395795 PQBP1O60828 265 aaKnown RBP18.97■□□□□ 0.63
CXCL12-206ENST00000395795 CYP21A2P08686 494 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 EDNRBP24530 442 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 STOX1Q6ZVD7 989 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 IQCA1Q86XH1 822 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 SLC43A3Q8NBI5 491 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 TBC1D5Q92609 795 aa18.97■□□□□ 0.63
CXCL12-206ENST00000395795 SGSM2O43147 1006 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
CXCL12-206ENST00000395795 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 GNASQ5JWF2 1037 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 IQSEC1Q6DN90 963 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 TLK2Q86UE8 772 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 ADGRF4Q8IZF3 695 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 STAG2Q8N3U4 1231 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 PCSK9Q8NBP7 692 aaKnown RBP18.96■□□□□ 0.63
CXCL12-206ENST00000395795 NUP133Q8WUM0 1156 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 SENP2Q9HC62 589 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 VTA1Q9NP79 307 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 PRKAG2Q9UGJ0 569 aa18.96■□□□□ 0.63
CXCL12-206ENST00000395795 LOC102724159A0A0B4J2E5 919 aa18.95■□□□□ 0.62
CXCL12-206ENST00000395795 COL9A3Q14050 684 aaPredicted RBP18.95■□□□□ 0.62
CXCL12-206ENST00000395795 PWP2Q15269 919 aaKnown RBP18.95■□□□□ 0.62
CXCL12-206ENST00000395795 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms