RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-205ENST00000395757 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
SREBF1-205ENST00000395757 TTC26A0AVF1 554 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CTAGE15A4D2H0 777 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CTAGE8P0CG41 777 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 STK4Q13043 487 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 TCP11X2Q5H9J9 407 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CCDC181Q5TID7 509 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CTAGE6Q86UF2 777 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CTAGE4Q8IX94 777 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
SREBF1-205ENST00000395757 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 KCNQ5Q9NR82 932 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 POLLQ9UGP5 575 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CLGNO14967 610 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 MFAP3LO75121 409 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 NR1I3Q14994 352 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
SREBF1-205ENST00000395757 TAF1P21675 1872 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 GOLGA6L9A6NEM1 432 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 RNF225M0QZC1 329 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-205ENST00000395757 ORC4O43929 436 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 GYPCP04921 128 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 ZNF658Q5TYW1 1059 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-205ENST00000395757 FAM43BQ6ZT52 329 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-205ENST00000395757 DGKHQ86XP1 1220 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 FEZ1Q99689 392 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 ZBTB21Q9ULJ3 1066 aa16.11■□□□□ 0.17
SREBF1-205ENST00000395757 CLRN2A0PK11 232 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 SEMA3EO15041 775 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 AMPD3Q01432 767 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 FUT2Q10981 343 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 DNAJC21Q5F1R6 531 aaKnown RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 HERC4Q5GLZ8 1057 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 RRAGAQ7L523 313 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 PARD6BQ9BYG5 372 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 CENPHQ9H3R5 247 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 AGPAT5Q9NUQ2 364 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 ADD3Q9UEY8 706 aaKnown RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 EPN1Q9Y6I3 576 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L10C9JJH3 530 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 LONP1P36776 959 aaKnown RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 ADGRG1Q9Y653 693 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
SREBF1-205ENST00000395757 CYP26C1Q6V0L0 522 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 EP400NLQ6ZTU2 488 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 KRT25Q7Z3Z0 450 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
SREBF1-205ENST00000395757 FLT1P17948 1338 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 BUB1O43683 1085 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 GOLGA6L1Q8N7Z2 621 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 MTRQ99707 1265 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 STAT3P40763 770 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 NFIAQ12857 509 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 PRR16Q569H4 304 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 OR8K1Q8NGG5 319 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 PLCG2P16885 1265 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 NAPGQ99747 312 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-205ENST00000395757 VPS18Q9P253 973 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
SREBF1-205ENST00000395757 GSPT2Q8IYD1 628 aaKnown RBP16.08■□□□□ 0.17
SREBF1-205ENST00000395757 TBC1D16Q8TBP0 767 aa16.08■□□□□ 0.17
SREBF1-205ENST00000395757 SERPINB13Q9UIV8 391 aa16.08■□□□□ 0.17
SREBF1-205ENST00000395757 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.17
SREBF1-205ENST00000395757 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.17
SREBF1-205ENST00000395757 AFF2P51816 1311 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 A0A1B0GTH6 734 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-205ENST00000395757 APBA3O96018 575 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-205ENST00000395757 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 GRM4Q14833 912 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 NPHP3-ACAD11A0A0J9YXS1 232 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 SFI1A8K8P3 1242 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 STXBP3O00186 592 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
SREBF1-205ENST00000395757 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms