RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NOL7Q9UMY1 257 aaKnown RBP22.06■■□□□ 1.12
LMNB1-202ENST00000395354 FRMPD2Q68DX3 1309 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-202ENST00000395354 KINO60870 393 aaKnown RBP22.05■■□□□ 1.12
LMNB1-202ENST00000395354 CUTAO60888 179 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 BMP15O95972 392 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 CCDC192P0DO97 292 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 TREML2Q5T2D2 321 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 FMR1NBQ8N0W7 255 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-202ENST00000395354 DAGLBQ8NCG7 672 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 BRI3BPQ8WY22 251 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 RPAP3Q9H6T3 665 aaPredicted RBP22.05■■□□□ 1.12
LMNB1-202ENST00000395354 GPCPD1Q9NPB8 672 aa22.05■■□□□ 1.12
LMNB1-202ENST00000395354 TRAPPC10P48553 1259 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 NOGQ13253 232 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 GPATCH4Q5T3I0 446 aaKnown RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 ANP32BQ92688 251 aaKnown RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 RRP36Q96EU6 259 aaKnown RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 RIOX1Q9H6W3 641 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 BARHL2Q9NY43 387 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 AGTPBP1Q9UPW5 1226 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 FAM237AA0A1B0GTK4 181 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 TMEM232C9JQI7 657 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 hCG_1984214I3L0E3 225 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 INHBEP58166 350 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 TTBK2Q6IQ55 1244 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 GPAT2Q6NUI2 795 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 ZNF713Q8N859 430 aaPredicted RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 CCDC12Q8WUD4 166 aaPredicted RBP22.04■■□□□ 1.12
LMNB1-202ENST00000395354 ZIC5Q96T25 663 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 PANK2Q9BZ23 570 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 TANGO6Q9C0B7 1094 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 PCDHA4Q9UN74 947 aa22.04■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L15C9J2P7 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L13C9JLJ4 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L11C9JVI0 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L18D6R9N7 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L22D6RA61 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L17D6RBQ6 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L19D6RCP7 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L20D6RJB6 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 USP17L24Q0WX57 530 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 CAMK4Q16566 473 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 UVSSAQ2YD98 709 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 BLIDQ8IZY5 108 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 KRI1Q8N9T8 703 aaKnown RBP22.03■■□□□ 1.12
LMNB1-202ENST00000395354 PTPN18Q99952 460 aa22.03■■□□□ 1.12
LMNB1-202ENST00000395354 BTBD19C9JJ37 291 aa22.02■■□□□ 1.12
LMNB1-202ENST00000395354 AOC2O75106 756 aa22.02■■□□□ 1.12
LMNB1-202ENST00000395354 MARCKSP29966 332 aaPredicted RBP22.02■■□□□ 1.12
LMNB1-202ENST00000395354 HOXA7P31268 230 aaPredicted RBP22.02■■□□□ 1.12
LMNB1-202ENST00000395354 VEGFBP49765 207 aa22.02■■□□□ 1.12
LMNB1-202ENST00000395354 CATSPERGQ6ZRH7 1159 aa22.02■■□□□ 1.12
LMNB1-202ENST00000395354 SEC63Q9UGP8 760 aaKnown RBP22.02■■□□□ 1.12
LMNB1-202ENST00000395354 FEM1BQ9UK73 627 aa22.02■■□□□ 1.12
LMNB1-202ENST00000395354 STXBP3O00186 592 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 STAT2P52630 851 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 SREBF2Q12772 1141 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
LMNB1-202ENST00000395354 PABPC4Q13310 644 aaKnown RBP eCLIP22.01■■□□□ 1.11
LMNB1-202ENST00000395354 WWC2Q6AWC2 1192 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 ANKRD23Q86SG2 305 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 ZNF579Q8NAF0 562 aaKnown RBP22.01■■□□□ 1.11
LMNB1-202ENST00000395354 CHURC1Q8WUH1 139 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 UBA5Q9GZZ9 404 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 PCDHB6Q9Y5E3 794 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
LMNB1-202ENST00000395354 A0A1B0GVL5 298 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 FLOT1O75955 427 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 PTPREP23469 700 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 SLC16A2P36021 539 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 NDUFA8P51970 172 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 COG2Q14746 738 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 RESP18Q5W5W9 173 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 PIBF1Q8WXW3 757 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 TIGD1Q96MW7 591 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 CPVLQ9H3G5 476 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 FBXO28Q9NVF7 368 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 HPSEQ9Y251 543 aa22■■□□□ 1.11
LMNB1-202ENST00000395354 PDHXO00330 501 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 PLA2G6O60733 806 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 TM4SF4P48230 202 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 SAMD1Q6SPF0 538 aaPredicted RBP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 BTNL9Q6UXG8 535 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 HEATR3Q7Z4Q2 680 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 FAM160B2Q86V87 743 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 FAM43AQ8N2R8 423 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 GPKOWQ92917 476 aaPredicted RBP eCLIP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 M0R2N6 131 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 PFKFB1P16118 471 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 OSBPP22059 807 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 TYRO3Q06418 890 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 SASS6Q6UVJ0 657 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 PRPF38AQ8NAV1 312 aaKnown RBP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 KIFC2Q96AC6 838 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 ZMYND12Q9H0C1 365 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 HOXC10Q9NYD6 342 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms