RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ADCY7P51828 1080 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 RNF187Q5TA31 235 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 ZNF34Q8IZ26 560 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 EYA3Q99504 573 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 ERCC3P19447 782 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 MECOMQ03112 1051 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 IFT20Q8IY31 132 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 TRIM49BA6NDI0 452 aa12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 BSDC1Q9NW68 430 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 GNPATO15228 680 aa12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 CFAP221Q4G0U5 840 aa12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-209ENST00000394804 TTC26A0AVF1 554 aa12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 RNF40O75150 1001 aa12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 DGKHQ86XP1 1220 aa12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 BIN2Q9UBW5 565 aaPredicted RBP12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.34
UBE2D3-209ENST00000394804 A6NNZ2 444 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 ZEB2O60315 1214 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 TCRBV5S4A2TA0A5A2 114 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 GYPCP04921 128 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 PLCG1P19174 1290 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 NAP1L4Q99733 375 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 NMT2O60551 498 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 NT5C2P49902 561 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 PAK2Q13177 524 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 ARFGAP2Q8N6H7 521 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 CUL5Q93034 780 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 ORC4O43929 436 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-209ENST00000394804 COL18A1P39060 1754 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 CETN3O15182 167 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 ZMYND10O75800 440 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 CYP2D6P10635 497 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 FGFR2P21802 821 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 CYP27A1Q02318 531 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 A0A1W2PQC6 194 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 SARSP49591 514 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 MYOCDQ8IZQ8 938 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 UFL1O94874 794 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 VSNL1P62760 191 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 ASIC2Q16515 512 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 HERC4Q5GLZ8 1057 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 ATRNO75882 1429 aa12.94□□□□□ -0.34
UBE2D3-209ENST00000394804 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 ST5P78524 1137 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 MAN2A1Q16706 1144 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 MINPP1Q9UNW1 487 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 JRKLQ9Y4A0 524 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 KLHL30Q0D2K2 578 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 MRC1P22897 1456 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 PRDX5P30044 214 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 EIF6P56537 245 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
UBE2D3-209ENST00000394804 CHP1Q99653 195 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms