RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GPR161Q8N6U8 529 aaKnown RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 GOLGA1Q92805 767 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 UIMC1Q96RL1 719 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ARGLU1Q9NWB6 273 aaPredicted RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 LRRC10BA6NIK2 292 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 KIF5BP33176 963 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 PICALMQ13492 652 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 TBC1D22AQ8WUA7 517 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 FUT8Q9BYC5 575 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 B4DLN1 442 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 H3BQF6 201 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 SLURP2P0DP57 97 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 FCER1AP12319 257 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 NPR1P16066 1061 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 LONP1P36776 959 aaKnown RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 TRAPPC10P48553 1259 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 CDK8P49336 464 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ZNF772Q68DY9 489 aaPredicted RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 DGKHQ86XP1 1220 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 CNGA4Q8IV77 575 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 CERS5Q8N5B7 392 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 NOA1Q8NC60 698 aaKnown RBP15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ZNF622Q969S3 477 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■■■□□ 18.3
GTF2F1-201ENST00000394456 UBA5Q9GZZ9 404 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 TMEM260Q9NX78 707 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 GUCA1BQ9UMX6 200 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 NRXN2Q9P2S2 1712 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 PLCG1P19174 1290 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 DPP8Q6V1X1 898 aaPredicted RBP15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 SRGAP1Q7Z6B7 1085 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 AGPAT5Q9NUQ2 364 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 CDC23Q9UJX2 597 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 TXLNAP40222 546 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 SCNN1DP51172 638 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 LONRF2Q1L5Z9 754 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 WDR59Q6PJI9 974 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
GTF2F1-201ENST00000394456 SNED1Q8TER0 1413 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 GAKO14976 1311 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 RCCD1A6NED2 376 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 KLRF2D3W0D1 207 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 FECHP22830 423 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 UBA7P41226 1012 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 STK4Q13043 487 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 TMC4Q7Z404 712 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 EYA3Q99504 573 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 DUSP9Q99956 384 aaKnown RBP15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 NAA15Q9BXJ9 866 aaKnown RBP15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 CALML3P27482 149 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 ARL6IP4Q66PJ3 421 aaKnown RBP15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 GJA10Q969M2 543 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 BARHL2Q9NY43 387 aa15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 TTF2Q9UNY4 1162 aaKnown RBP15.14■□□□□ 0.01
GTF2F1-201ENST00000394456 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 CCNT1O60563 726 aaKnown RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 PLCG2P16885 1265 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 EIF6P56537 245 aaKnown RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 SMC1AQ14683 1233 aaKnown RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 CCDC178Q5BJE1 867 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 CT47A1Q5JQC4 288 aaPredicted RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 C16orf86Q6ZW13 317 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 SLF2Q8IX21 1173 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 UBXN6Q9BZV1 441 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 KCNQ5Q9NR82 932 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 DUSP10Q9Y6W6 482 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 PALM3A6NDB9 673 aaPredicted RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 N4BP1O75113 896 aaKnown RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 PDE6BP35913 854 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 TECP42680 631 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 HERVK_113P62684 666 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 TTI2Q6NXR4 508 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 FAM163AQ96GL9 167 aaPredicted RBP15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 DBNDD1Q9H9R9 158 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 ARFGAP3Q9NP61 516 aa15.13■□□□□ 0.01
GTF2F1-201ENST00000394456 G3V3G9 751 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 ALDH1B1P30837 517 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 NAPAP54920 295 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 ANKRD40Q6AI12 368 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms