RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 CCDC121Q6ZUS5 278 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 CAGE1Q8TC20 777 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 RRP36Q96EU6 259 aaKnown RBP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 ETAA1Q9NY74 926 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 TPX2Q9ULW0 747 aaKnown RBP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 ENC1O14682 589 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 SIK1P57059 783 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 XRCC4Q13426 336 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 ZNF827Q17R98 1081 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 RNPC3Q96LT9 517 aaKnown RBP20.97■□□□□ 0.95
HOXC6-202ENST00000394331 BTBD18B2RXH4 712 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 PPP2R5BQ15173 497 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 LACTB2Q53H82 288 aaPredicted RBP20.97■□□□□ 0.95
HOXC6-202ENST00000394331 CDCA2Q69YH5 1023 aaPredicted RBP20.97■□□□□ 0.95
HOXC6-202ENST00000394331 PPP4R3AQ6IN85 833 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 KIAA1328Q86T90 577 aa20.97■□□□□ 0.95
HOXC6-202ENST00000394331 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
HOXC6-202ENST00000394331 MGRN1O60291 552 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 SLMAPQ14BN4 828 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 DDB1Q16531 1140 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
HOXC6-202ENST00000394331 UBAC1Q9BSL1 405 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 CENPHQ9H3R5 247 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 SERTAD1Q9UHV2 236 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 SRGAP2O75044 1071 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 PDHBP11177 359 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 CYP7A1P22680 504 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 PTPREP23469 700 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 KRT83P78385 493 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 SPAG1Q07617 926 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 PPARAQ07869 468 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 MIGA1Q8NAN2 632 aa20.96■□□□□ 0.95
HOXC6-202ENST00000394331 THRAP3Q9Y2W1 955 aaKnown RBP20.96■□□□□ 0.95
HOXC6-202ENST00000394331 A0A0G2JS52 829 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 PDE2AO00408 941 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-202ENST00000394331 KRT86O43790 486 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 MDH1P40925 334 aaKnown RBP20.95■□□□□ 0.94
HOXC6-202ENST00000394331 IFT88Q13099 833 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 FANCBQ8NB91 859 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 PURBQ96QR8 312 aaKnown RBP20.95■□□□□ 0.94
HOXC6-202ENST00000394331 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 UBE2Q2LH0YL09 131 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 PRLRP16471 622 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 GUCY1A2P33402 732 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 TSEN2Q8NCE0 465 aaKnown RBP20.95■□□□□ 0.94
HOXC6-202ENST00000394331 CAPZA3Q96KX2 299 aa20.95■□□□□ 0.94
HOXC6-202ENST00000394331 NUP88Q99567 741 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-202ENST00000394331 RWDD2BP57060 319 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 GLE1Q53GS7 698 aaKnown RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 CCDC122Q5T0U0 273 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 ZNF654Q8IZM8 581 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 STK11IPQ8N1F8 1099 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 MREGQ8N565 214 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 ESR2Q92731 530 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 TRIM10Q9UDY6 481 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 ANAPC4Q9UJX5 808 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 FBXO2Q9UK22 296 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 NR1D1P20393 614 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 GBP2P32456 591 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 HERVK_113P62684 666 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 IQCKQ8N0W5 287 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 ZIM3Q96PE6 472 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 CEP131Q9UPN4 1083 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 KRT9P35527 623 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 TOB1P50616 345 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 HDLBPQ00341 1268 aaKnown RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 NAA25Q14CX7 972 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 ANKRD20A8PQ5CZ79 823 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 CRELD2Q6UXH1 353 aaPredicted RBP20.94■□□□□ 0.94
HOXC6-202ENST00000394331 DNAJC7Q99615 494 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 KCNJ14Q9UNX9 436 aa20.94■□□□□ 0.94
HOXC6-202ENST00000394331 DOT1LQ8TEK3 1739 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 DNAJC8O75937 253 aaPredicted RBP20.93■□□□□ 0.94
HOXC6-202ENST00000394331 C2orf54Q08AI8 447 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 EBF2Q9HAK2 575 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 ZNF804BA4D1E1 1349 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 MAGEB6P1A0A0J9YX57 407 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 HMGB1P1B2RPK0 211 aaPredicted RBP20.93■□□□□ 0.94
HOXC6-202ENST00000394331 ITPK1Q13572 414 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 ARMC9Q7Z3E5 817 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 CCDC26Q8TAB7 109 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
HOXC6-202ENST00000394331 GCKP35557 465 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 TCP11Q8WWU5 503 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 ITFG2Q969R8 447 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 CYFIP2Q96F07 1278 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 STIM2Q9P246 746 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 GHRP10912 638 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 ATP1A2P50993 1020 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 GUCY1A3Q02108 690 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 SPECC1Q5M775 1068 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
HOXC6-202ENST00000394331 RNF26Q9BY78 433 aaPredicted RBP20.92■□□□□ 0.94
HOXC6-202ENST00000394331 ABCF2Q9UG63 623 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms