RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MORC4Q8TE76 937 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 TCP11L1Q9NUJ3 509 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 CYP39A1Q9NYL5 469 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 ICAM1P05362 532 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 ALAS1P13196 640 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 PPIGQ13427 754 aaKnown RBP eCLIP20.67■□□□□ 0.92e-11■■□□□ 12.5
SNRPA1-202ENST00000394082 AAMPQ13685 434 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 VPS53Q5VIR6 699 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 IQSEC1Q6DN90 963 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 SLC43A3Q8NBI5 491 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 PNMA2Q9UL42 364 aa20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 ISY1Q9ULR0 285 aaKnown RBP20.67■□□□□ 0.9
SNRPA1-202ENST00000394082 VCANP13611 3396 aa20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 TLR3O15455 904 aaKnown RBP20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 NMT2O60551 498 aa20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 CD4P01730 458 aa20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 IRX5P78411 483 aaPredicted RBP20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 MCMDC2Q4G0Z9 681 aa20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 RANBP17Q9H2T7 1088 aaKnown RBP20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
SNRPA1-202ENST00000394082 ASTN1O14525 1302 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 FGAP02671 866 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 NT5C2P49902 561 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 RASIP1Q5U651 963 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 TLK2Q86UE8 772 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 TMEM199Q8N511 208 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 VTI1AQ96AJ9 217 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 VTA1Q9NP79 307 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 CCPG1Q9ULG6 757 aa20.65■□□□□ 0.9
SNRPA1-202ENST00000394082 LRRC37A2A6NM11 1700 aa20.64■□□□□ 0.9
SNRPA1-202ENST00000394082 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 ZEB2O60315 1214 aa20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 FSCN1Q16658 493 aaKnown RBP20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 MUM1L1Q5H9M0 696 aa20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 TAPT1Q6NXT6 567 aa20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 MAFAQ8NHW3 353 aaPredicted RBP20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 TTC14Q96N46 770 aa20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.64■□□□□ 0.892e-8■□□□□ 10.7
SNRPA1-202ENST00000394082 AP5M1Q9H0R1 490 aa20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 ADD3Q9UEY8 706 aaKnown RBP20.64■□□□□ 0.89
SNRPA1-202ENST00000394082 HSPD1P10809 573 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-202ENST00000394082 DNAJB2P25686 324 aa20.63■□□□□ 0.89
SNRPA1-202ENST00000394082 TMEM240Q5SV17 173 aa20.63■□□□□ 0.89
SNRPA1-202ENST00000394082 PSRC1Q6PGN9 363 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-202ENST00000394082 COL25A1Q9BXS0 654 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-202ENST00000394082 SMPD1P17405 629 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 NOL8Q76FK4 1167 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 C16orf59Q7L2K0 433 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 FAM227BQ96M60 508 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 TMEM47Q9BQJ4 181 aa20.62■□□□□ 0.89
SNRPA1-202ENST00000394082 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 CSF2RAP15509 400 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 BEX3Q00994 111 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 ITGA7Q13683 1181 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 CXCL17Q6UXB2 119 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 NSMFQ6X4W1 530 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 CRBNQ96SW2 442 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 MAF1Q9H063 256 aa20.61■□□□□ 0.89
SNRPA1-202ENST00000394082 DYNC1LI2O43237 492 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 SNHG28P0DPA3 235 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 PDHBP11177 359 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 FOSL2P15408 326 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 MFAP1P55081 439 aaKnown RBP20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 SNAP25P60880 206 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 DUSP28Q4G0W2 176 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 RASGRP2Q7LDG7 609 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 PDGFCQ9NRA1 345 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 LCTP09848 1927 aa20.6■□□□□ 0.89
SNRPA1-202ENST00000394082 GRIN2DO15399 1336 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 CCDC171Q6TFL3 1326 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 RBM47A0AV96 593 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 BAATQ14032 418 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 AKNAD1Q5T1N1 836 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 TTBK2Q6IQ55 1244 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 FBXO16Q8IX29 292 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 TIFAQ96CG3 184 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 RNF41Q9H4P4 317 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 ZNF576Q9H609 170 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 IL23AQ9NPF7 189 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 TOMM22Q9NS69 142 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 CHD9Q3L8U1 2897 aa20.59■□□□□ 0.89
SNRPA1-202ENST00000394082 SLC16A2P36021 539 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 ALDH5A1P51649 535 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 ZNF543Q08ER8 600 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 MFSD6Q6ZSS7 791 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 ZNF589Q86UQ0 364 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 SMC5Q8IY18 1101 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 HERVK_113Q902F9 699 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 CHMP4CQ96CF2 233 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 MTIF3Q9H2K0 278 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 HIPK3Q9H422 1215 aa20.58■□□□□ 0.89
SNRPA1-202ENST00000394082 SPTBN5Q9NRC6 3674 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms