RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 NKX1-1Q15270 411 aaPredicted RBP25.35■■□□□ 1.65
RARA-202ENST00000394081 IL17AQ16552 155 aa25.35■■□□□ 1.65
RARA-202ENST00000394081 HAUS3Q68CZ6 603 aa25.35■■□□□ 1.65
RARA-202ENST00000394081 MREGQ8N565 214 aa25.35■■□□□ 1.65
RARA-202ENST00000394081 EPN3Q9H201 632 aa25.35■■□□□ 1.65
RARA-202ENST00000394081 RASSF10A6NK89 507 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 B4DLN1 442 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 DDAH1O94760 285 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 TBC1D8BQ0IIM8 1120 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 ZSCAN29Q8IWY8 852 aaPredicted RBP25.34■■□□□ 1.65
RARA-202ENST00000394081 LCORLQ8N3X6 602 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 HDAC7Q8WUI4 952 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 ARL8AQ96BM9 186 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 DISC1Q9NRI5 854 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 BICDL2A1A5D9 508 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 PRKAB2O43741 272 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 KIF1CO43896 1103 aaKnown RBP25.34■■□□□ 1.65
RARA-202ENST00000394081 PAFAH1B1P43034 410 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 DRP2Q13474 957 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 TSEN2Q8NCE0 465 aaKnown RBP25.34■■□□□ 1.65
RARA-202ENST00000394081 ZSCAN10Q96SZ4 725 aaPredicted RBP25.34■■□□□ 1.65
RARA-202ENST00000394081 TSKSQ9UJT2 592 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 MAPK8IP1Q9UQF2 711 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 DUSP10Q9Y6W6 482 aa25.34■■□□□ 1.65
RARA-202ENST00000394081 DLEC1Q9Y238 1755 aa25.33■■□□□ 1.65
RARA-202ENST00000394081 PRDM1O75626 825 aa25.33■■□□□ 1.65
RARA-202ENST00000394081 PCP11498 1178 aaKnown RBP25.33■■□□□ 1.65
RARA-202ENST00000394081 SLC5A1P13866 664 aa25.33■■□□□ 1.65
RARA-202ENST00000394081 PMS1P54277 932 aaKnown RBP25.33■■□□□ 1.65
RARA-202ENST00000394081 GIGYF2Q6Y7W6 1299 aaKnown RBP25.33■■□□□ 1.65
RARA-202ENST00000394081 TMTC3Q6ZXV5 915 aa25.33■■□□□ 1.65
RARA-202ENST00000394081 ENAHQ8N8S7 591 aaPredicted RBP25.33■■□□□ 1.65
RARA-202ENST00000394081 PLAGL2Q9UPG8 496 aa25.33■■□□□ 1.65
RARA-202ENST00000394081 RASGRF1Q13972 1273 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 EZH2Q15910 746 aaKnown RBP25.33■■□□□ 1.64
RARA-202ENST00000394081 CCDC96Q2M329 555 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 CCDC181Q5TID7 509 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 IFT20Q8IY31 132 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 IQCKQ8N0W5 287 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 MAGEF1Q9HAY2 307 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 LRWD1Q9UFC0 647 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 SAMM50Q9Y512 469 aa25.33■■□□□ 1.64
RARA-202ENST00000394081 H0YHG0 523 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 KLRC4O43908 158 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 NAP1L1P55209 391 aaKnown RBP25.32■■□□□ 1.64
RARA-202ENST00000394081 PDCLQ13371 301 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 ZIM3Q96PE6 472 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 IFIH1Q9BYX4 1025 aaKnown RBP25.32■■□□□ 1.64
RARA-202ENST00000394081 TROAPQ12815 778 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 C8orf74Q6P047 294 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 PCDHA13Q9Y5I0 950 aa25.32■■□□□ 1.64
RARA-202ENST00000394081 RREB1Q92766 1687 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 ZNF263O14978 683 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 CCDC172P0C7W6 258 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 LSP1P33241 339 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 IFIT1BQ5T764 474 aaKnown RBP25.31■■□□□ 1.64
RARA-202ENST00000394081 CSGALNACT2Q8N6G5 542 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 C4orf32Q8N8J7 132 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 DONSONQ9NYP3 566 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 CAPN6Q9Y6Q1 641 aa25.31■■□□□ 1.64
RARA-202ENST00000394081 PJA2O43164 708 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 PLEKHA8P1O95397 391 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 GPTP24298 496 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 CCNE1P24864 410 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 CYP27A1Q02318 531 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 DUSP9Q99956 384 aaKnown RBP25.3■■□□□ 1.64
RARA-202ENST00000394081 CUEDC2Q9H467 287 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 GDF3Q9NR23 364 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 KBTBD4Q9NVX7 518 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 CNTNAP5Q8WYK1 1306 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 CHUKO15111 745 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 MCM7P33993 719 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 PAK2Q13177 524 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 C3orf20Q8ND61 904 aa25.3■■□□□ 1.64
RARA-202ENST00000394081 ZCRB1Q8TBF4 217 aaKnown RBP25.3■■□□□ 1.64
RARA-202ENST00000394081 DUOX1Q9NRD9 1551 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 SMTNP53814 917 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 FKBP15Q5T1M5 1219 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 CFAP58Q5T655 872 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 NAA35Q5VZE5 725 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 PIK3AP1Q6ZUJ8 805 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.29■■□□□ 1.641e-6■■■■■ 58.1
RARA-202ENST00000394081 ZNF142P52746 1687 aaPredicted RBP25.29■■□□□ 1.64
RARA-202ENST00000394081 PPP1R37O75864 691 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 CALML3P27482 149 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 NAALADL2Q58DX5 795 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 IQCA1Q86XH1 822 aa25.29■■□□□ 1.64
RARA-202ENST00000394081 CCDC47Q96A33 483 aaKnown RBP25.29■■□□□ 1.64
RARA-202ENST00000394081 C21orf2O43822 256 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 PDE8AO60658 829 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 COBLL1Q53SF7 1204 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 RNF10Q8N5U6 811 aaKnown RBP25.28■■□□□ 1.64
RARA-202ENST00000394081 P2RX5Q93086 422 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 CCSER1Q9C0I3 900 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 VCPKMTQ9H867 229 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 HMGB1P1B2RPK0 211 aaPredicted RBP25.28■■□□□ 1.64
RARA-202ENST00000394081 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
RARA-202ENST00000394081 SCG2P13521 617 aa25.28■■□□□ 1.64
RARA-202ENST00000394081 PSEN1P49768 467 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms