RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZRSR1Q15695 479 aaKnown RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L6PQ6QN14 398 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 PPP4R3CPQ6ZMV5 832 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 FAM160B2Q86V87 743 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 PDILTQ8N807 584 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 CNNM3Q8NE01 707 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 EPSTI1Q96J88 318 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 TIGD1Q96MW7 591 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 ZNF112Q9UJU3 913 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 PITPNM2Q9BZ72 1349 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 GRIN3BO60391 1043 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 TAL1P17542 331 aaPredicted RBP9.82□□□□□ -0.84
TDP1-203ENST00000393454 SPP2Q13103 211 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 MTMR2Q13614 643 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 DOCK1Q14185 1865 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 LONRF3Q496Y0 759 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 ARL6IP4Q66PJ3 421 aaKnown RBP9.82□□□□□ -0.84
TDP1-203ENST00000393454 DLK2Q6UY11 383 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 DTHD1Q6ZMT9 781 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 USP49Q70CQ1 688 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 C4orf32Q8N8J7 132 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 SYMPKQ92797 1274 aaKnown RBP9.82□□□□□ -0.84
TDP1-203ENST00000393454 KIAA1683Q9H0B3 1180 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 FBXO28Q9NVF7 368 aa9.82□□□□□ -0.84
TDP1-203ENST00000393454 ADM5C9JUS6 153 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 WDR46O15213 610 aaKnown RBP9.81□□□□□ -0.84
TDP1-203ENST00000393454 USP14P54578 494 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 TRAF1Q13077 416 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 DGKZQ13574 1117 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 IL17AQ16552 155 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 ANO6Q4KMQ2 910 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 KRBA2Q6ZNG9 492 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 LPAR1Q92633 364 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 TANGO6Q9C0B7 1094 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 TMEM60Q9H2L4 133 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 HOOK1Q9UJC3 728 aaKnown RBP9.81□□□□□ -0.84
TDP1-203ENST00000393454 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 SRCAPQ6ZRS2 3230 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 NEMFO60524 1076 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 PLA2G6O60733 806 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 PTPRAP18433 802 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 EPHX2P34913 555 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
TDP1-203ENST00000393454 KRT26Q7Z3Y9 468 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 DHX58Q96C10 678 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 SLF1Q9BQI6 1058 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 RANBP17Q9H2T7 1088 aaKnown RBP9.81□□□□□ -0.84
TDP1-203ENST00000393454 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 SERTAD1Q9UHV2 236 aa9.81□□□□□ -0.84
TDP1-203ENST00000393454 CTDP1Q9Y5B0 961 aaPredicted RBP9.81□□□□□ -0.84
TDP1-203ENST00000393454 LAD1O00515 517 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 OR52Z1P0C646 297 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 LONP1P36776 959 aaKnown RBP9.8□□□□□ -0.84
TDP1-203ENST00000393454 TXLNAP40222 546 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 BACE1P56817 501 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 PNOCQ13519 176 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 STX1AQ16623 288 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
TDP1-203ENST00000393454 USP50Q70EL3 339 aaPredicted RBP9.8□□□□□ -0.84
TDP1-203ENST00000393454 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 RASSF8Q8NHQ8 419 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 WDR18Q9BV38 432 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 ANO3Q9BYT9 981 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
TDP1-203ENST00000393454 A0A087WWV3 80 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 GLTPD2A6NH11 291 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 BIN1O00499 593 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 MARCH6O60337 910 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 USP2O75604 605 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 FLOT1O75955 427 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 TDP2O95551 362 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 VCAM1P19320 739 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 ORC2Q13416 577 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 CALCRLQ16602 461 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 CEP57L1Q8IYX8 460 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 PRPF38AQ8NAV1 312 aaKnown RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 RPAP3Q9H6T3 665 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 EMILIN3Q9NT22 766 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 ANO10Q9NW15 660 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 SSC5DA1L4H1 1573 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 SMCHD1A6NHR9 2005 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 MEIS2O14770 477 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 CFBP00751 764 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 CDC25AP30304 524 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 HOXA13P31271 388 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 PRPHP41219 470 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 TXKP42681 527 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 HMGCS2P54868 508 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
TDP1-203ENST00000393454 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 MCTP2Q6DN12 878 aa9.79□□□□□ -0.84
TDP1-203ENST00000393454 ISM2Q6H9L7 571 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms