RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.33
SNX11-202ENST00000393405 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 PRCPP42785 496 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 COPB1P53618 953 aaKnown RBP17.08■□□□□ 0.32
SNX11-202ENST00000393405 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 GRIK5Q16478 980 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
SNX11-202ENST00000393405 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 MICALL1Q8N3F8 863 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
SNX11-202ENST00000393405 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.32
SNX11-202ENST00000393405 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
SNX11-202ENST00000393405 CYTH3O43739 400 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 STAT6P42226 847 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 DNAJC21Q5F1R6 531 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 TRIM49BA6NDI0 452 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 M0R2N6 131 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 SHOX2O60902 331 aaPredicted RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 NDUFA10O95299 355 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 CKAP4Q07065 602 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 PAPD7Q5XG87 772 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 DGKHQ86XP1 1220 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 PYM1Q9BRP8 204 aaKnown RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
SNX11-202ENST00000393405 EPN1Q9Y6I3 576 aaPredicted RBP17.07■□□□□ 0.32
SNX11-202ENST00000393405 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 GNPATO15228 680 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 SUGP1Q8IWZ8 645 aaKnown RBP17.06■□□□□ 0.32
SNX11-202ENST00000393405 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 KRT9P35527 623 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 GRM4Q14833 912 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 INF2Q27J81 1249 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 KAT2BQ92831 832 aa17.06■□□□□ 0.32
SNX11-202ENST00000393405 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
SNX11-202ENST00000393405 CCDC194A0A1B0GVG4 234 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 RPS6KA4O75676 772 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 PLIN2Q99541 437 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 CXorf56Q9H5V9 222 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 REXO2Q9Y3B8 237 aaKnown RBP17.05■□□□□ 0.32
SNX11-202ENST00000393405 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 SAR1BQ9Y6B6 198 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 MYH1P12882 1939 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 A0A087WUV0 522 aaPredicted RBP17.05■□□□□ 0.32
SNX11-202ENST00000393405 ZPR1O75312 459 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
SNX11-202ENST00000393405 STIM1Q13586 685 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 LRRC15Q8TF66 581 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
SNX11-202ENST00000393405 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 LDHBP07195 334 aaKnown RBP17.05■□□□□ 0.32
SNX11-202ENST00000393405 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
SNX11-202ENST00000393405 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
SNX11-202ENST00000393405 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 RGL2O15211 777 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 NFIXQ14938 502 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 CCDC91Q7Z6B0 441 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 OR8K1Q8NGG5 319 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
SNX11-202ENST00000393405 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 ROBO3Q96MS0 1386 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 STXBP3O00186 592 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 RUBCNQ92622 972 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
SNX11-202ENST00000393405 A0A1W2PQC6 194 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 CCDC172P0C7W6 258 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 LIG3P49916 1009 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 UBXN1Q04323 297 aa17.03■□□□□ 0.32
SNX11-202ENST00000393405 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
SNX11-202ENST00000393405 SWT1Q5T5J6 900 aaKnown RBP17.03■□□□□ 0.32
SNX11-202ENST00000393405 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms