RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 KIFC2Q96AC6 838 aa19.9■□□□□ 0.78
MBD4-202ENST00000393278 TMEM60Q9H2L4 133 aa19.9■□□□□ 0.78
MBD4-202ENST00000393278 AS3MTQ9HBK9 375 aa19.9■□□□□ 0.78
MBD4-202ENST00000393278 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
MBD4-202ENST00000393278 FZD1Q9UP38 647 aa19.9■□□□□ 0.78
MBD4-202ENST00000393278 POLR2AP24928 1970 aaKnown RBP19.9■□□□□ 0.78
MBD4-202ENST00000393278 CCNT1O60563 726 aaKnown RBP19.89■□□□□ 0.77
MBD4-202ENST00000393278 PRPHP41219 470 aa19.89■□□□□ 0.77
MBD4-202ENST00000393278 IL17AQ16552 155 aa19.89■□□□□ 0.77
MBD4-202ENST00000393278 NOL9Q5SY16 702 aaKnown RBP19.89■□□□□ 0.77
MBD4-202ENST00000393278 USP50Q70EL3 339 aaPredicted RBP19.89■□□□□ 0.77
MBD4-202ENST00000393278 SULF1Q8IWU6 871 aa19.89■□□□□ 0.77
MBD4-202ENST00000393278 USP14P54578 494 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 MTMR2Q13614 643 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 LONRF3Q496Y0 759 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 KRBA2Q6ZNG9 492 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 ELOA2Q8IYF1 753 aaPredicted RBP19.88■□□□□ 0.77
MBD4-202ENST00000393278 SYMPKQ92797 1274 aaKnown RBP19.88■□□□□ 0.77
MBD4-202ENST00000393278 EPSTI1Q96J88 318 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 FBXO28Q9NVF7 368 aa19.88■□□□□ 0.77
MBD4-202ENST00000393278 GLTPD2A6NH11 291 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 MEIS2O14770 477 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 EDIL3O43854 480 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 NEMFO60524 1076 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 LONP1P36776 959 aaKnown RBP19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 SPP2Q13103 211 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 AP3B2Q13367 1082 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 MCTP2Q6DN12 878 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP17L6PQ6QN14 398 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.87■□□□□ 0.77
MBD4-202ENST00000393278 KIAA1468Q9P260 1216 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 ADM5C9JUS6 153 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 POLR2DO15514 142 aaKnown RBP19.87■□□□□ 0.77
MBD4-202ENST00000393278 USP2O75604 605 aaPredicted RBP19.87■□□□□ 0.77
MBD4-202ENST00000393278 OR52Z1P0C646 297 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 EPHX2P34913 555 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 BACE1P56817 501 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 DTHD1Q6ZMT9 781 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 TEX2Q8IWB9 1127 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 ZNF280CQ8ND82 737 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 CNNM3Q8NE01 707 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 EMILIN3Q9NT22 766 aa19.87■□□□□ 0.77
MBD4-202ENST00000393278 OPLAHO14841 1288 aa19.86■□□□□ 0.77
MBD4-202ENST00000393278 VCAM1P19320 739 aa19.86■□□□□ 0.77
MBD4-202ENST00000393278 CCDC174Q6PII3 467 aa19.86■□□□□ 0.77
MBD4-202ENST00000393278 ZC3H15Q8WU90 426 aaKnown RBP19.86■□□□□ 0.77
MBD4-202ENST00000393278 TAL1P17542 331 aaPredicted RBP19.85■□□□□ 0.77
MBD4-202ENST00000393278 DGKZQ13574 1117 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 ANO6Q4KMQ2 910 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 PPP4R3AQ6IN85 833 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 KRT26Q7Z3Y9 468 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 PRPF38AQ8NAV1 312 aaKnown RBP19.85■□□□□ 0.77
MBD4-202ENST00000393278 ERCC4Q92889 916 aaPredicted RBP19.85■□□□□ 0.77
MBD4-202ENST00000393278 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 ANO3Q9BYT9 981 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 PHIPQ8WWQ0 1821 aa19.85■□□□□ 0.77
MBD4-202ENST00000393278 A0A087X0B3 334 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 PIK3CDO00329 1044 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 ACTN4O43707 911 aaKnown RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 TDP2O95551 362 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 STX1AQ16623 288 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 UVSSAQ2YD98 709 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 DLK2Q6UY11 383 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 PDILTQ8N807 584 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 FAM200AQ8TCP9 573 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 C12orf42Q96LP6 360 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 SERTAD1Q9UHV2 236 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 ZHX2Q9Y6X8 837 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 FOSP01100 380 aaPredicted RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 GCFC2P16383 781 aaKnown RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 PRKG1Q13976 671 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 SAMD1Q6SPF0 538 aaPredicted RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
MBD4-202ENST00000393278 NAP1L4Q99733 375 aaKnown RBP19.84■□□□□ 0.77
MBD4-202ENST00000393278 C19orf81C9J6K1 198 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 CAVIN2O95810 425 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 MDM2Q00987 491 aaPredicted RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 KANK3Q6NY19 840 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 DHX58Q96C10 678 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 MTMR9Q96QG7 549 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 P2RX7Q99572 595 aaKnown RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 PYM1Q9BRP8 204 aaKnown RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 TANGO6Q9C0B7 1094 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 RPAP3Q9H6T3 665 aaPredicted RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 ANO10Q9NW15 660 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 HOOK1Q9UJC3 728 aaKnown RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 TUBE1Q9UJT0 475 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 MRPL11Q9Y3B7 192 aaKnown RBP19.83■□□□□ 0.76
MBD4-202ENST00000393278 MYH7BA7E2Y1 1941 aa19.83■□□□□ 0.76
MBD4-202ENST00000393278 ABCB11O95342 1321 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms