RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 VWA5AO00534 786 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
PDGFD-202ENST00000393158 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 NR1I2O75469 434 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 KRT85P78386 507 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 CEBPZQ03701 1054 aaKnown RBP12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 LDHDQ86WU2 507 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 FEM1BQ9UK73 627 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
PDGFD-202ENST00000393158 UBE2HP62256 183 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
PDGFD-202ENST00000393158 CCDC96Q2M329 555 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 MUM1L1Q5H9M0 696 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 SLC37A4O43826 429 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 PPP6R2O75170 966 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 PPATQ06203 517 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 TMEM132BQ14DG7 1078 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
PDGFD-202ENST00000393158 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
PDGFD-202ENST00000393158 RPTORQ8N122 1335 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 HOXA7P31268 230 aaPredicted RBP12.38□□□□□ -0.43
PDGFD-202ENST00000393158 HSD17B4P51659 736 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 GALNT17Q6IS24 598 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 ICAM1P05362 532 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 LBX2Q6XYB7 198 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 PTPN18Q99952 460 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 SCAND2PQ9GZW5 306 aaPredicted RBP12.38□□□□□ -0.43
PDGFD-202ENST00000393158 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
PDGFD-202ENST00000393158 KIF3AQ9Y496 699 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 PTPREP23469 700 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 HAS1Q92839 578 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
PDGFD-202ENST00000393158 NFIBO00712 420 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 ADALQ6DHV7 355 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 ATG4CQ96DT6 458 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 DSG3P32926 999 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 NAPAP54920 295 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 INF2Q27J81 1249 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 RESP18Q5W5W9 173 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 FAM155AB1AL88 458 aaPredicted RBP12.37□□□□□ -0.43
PDGFD-202ENST00000393158 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 NLRP5P59047 1200 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 PPIL2Q13356 520 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
PDGFD-202ENST00000393158 NDUFA8P51970 172 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 MTRQ99707 1265 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 CYP3A7-CYP3A51PA0A087WV96 503 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 CYP3A7P24462 503 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 PRPF38AQ8NAV1 312 aaKnown RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 FGD4Q96M96 766 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 LOXHD1Q8IVV2 1947 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 SPTLC2O15270 562 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 USH1GQ495M9 461 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 MMTAG2Q9BU76 263 aaKnown RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 AMNQ9BXJ7 453 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
PDGFD-202ENST00000393158 SRPRBQ9Y5M8 271 aaKnown RBP12.36□□□□□ -0.43
PDGFD-202ENST00000393158 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 TDP2O95551 362 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 GJA10Q969M2 543 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 LAMA2P24043 3122 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms