RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 Q3C1V9 767 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DRC7Q8IY82 874 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ANKRD20A12PQ8NF67 263 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 IL17RAQ96F46 866 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TACO1Q9BSH4 297 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DCP1AQ9NPI6 582 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 EIF3CLB5ME19 914 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PTPREP23469 700 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ADD2P35612 726 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 HAUS7Q99871 368 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PORCNQ9H237 461 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MYO5AQ9Y4I1 1855 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CNMDO75829 334 aa12.99□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
TRAF3IP2-208ENST00000392556 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
TRAF3IP2-208ENST00000392556 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GRB14Q14449 540 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SHROOM1Q2M3G4 852 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 NEK4P51957 841 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SEPT2Q15019 361 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ABRAQ8N0Z2 381 aa12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-208ENST00000392556 COPB2P35606 906 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TRIM32Q13049 653 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 OLFML2BQ68BL8 750 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 RNF217Q8TC41 542 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MROH8Q9H579 483 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TMX2Q9Y320 296 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 USP27XA6NNY8 438 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ERC2O15083 957 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 COL6A1P12109 1028 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ANAPC15P60006 121 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ATP2B2Q01814 1243 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 C11orf91Q3C1V1 193 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SGSM3Q96HU1 749 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TRIM5Q9C035 493 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
TRAF3IP2-208ENST00000392556 WDR46O15213 610 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 E2F4Q16254 413 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LHX8Q68G74 356 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GDF15Q99988 308 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 KANSL2Q9H9L4 492 aa12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 MBD4O95243 580 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 SLC25A27O95847 323 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 ZSCAN22P10073 491 aaPredicted RBP12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 DSG3P32926 999 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 ICA1Q05084 483 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 SRRTQ9BXP5 876 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 VCPKMTQ9H867 229 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 ARMT1Q9H993 441 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 CBX8Q9HC52 389 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 BTBD7Q9P203 1132 aa12.96□□□□□ -0.34
TRAF3IP2-208ENST00000392556 APBB1O00213 710 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms