RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 ACRP10323 421 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 THBS2P35442 1172 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CORO7P57737 925 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CHMP4BP1P59074 171 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CACNB2Q08289 660 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 SMAD4Q13485 552 aaKnown RBP2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 SNW1Q13573 536 aaKnown RBP2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 C9orf131Q5VYM1 1079 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 IGFL4Q6B9Z1 124 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 IGDCC4Q8TDY8 1250 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 USP33Q8TEY7 942 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 ZG16BQ96DA0 208 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 ZNF503Q96F45 646 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 KIF2CQ99661 725 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 ANTXR1Q9H6X2 564 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 AP5S1Q9NUS5 200 aa2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 DBR1Q9UK59 544 aaKnown RBP2.18□□□□□ -2.06
RNU6-1239P-201ENST00000391310 C9orf118A6NHY6 69 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CHURC1-FNTBB4DL54 471 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 RGS13O14921 159 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 TREHO43280 583 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 NARSO43776 548 aaKnown RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 ZNF623O75123 536 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 USP17L7P0C7H9 530 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 VAV1P15498 845 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 TFE3P19532 575 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 GBP1P32455 592 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 MCM7P33993 719 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 IL12RB1P42701 662 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CTSKP43235 329 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 EPHB4P54760 987 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 KRTAP10-11P60412 298 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 TRIM26Q12899 539 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CCDC85BQ15834 202 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 NBPF12Q5TAG4 269 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 HLA-DQA1Q5Y7H0 255 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 MCTP2Q6DN12 878 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 RNF207Q6ZRF8 634 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 BHLHA9Q7RTU4 235 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 JAMLQ86YT9 394 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 AEBP1Q8IUX7 1158 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 TXNDC5Q8NBS9 432 aaKnown RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 LCORQ96JN0 433 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 C12orf49Q9H741 205 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CHST7Q9NS84 486 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 REV1Q9UBZ9 1251 aa2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 TTF2Q9UNY4 1162 aaKnown RBP2.17□□□□□ -2.06
RNU6-1239P-201ENST00000391310 UBOX5O94941 541 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 GLI4P10075 376 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CYP2C8P10632 490 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 LIG3P49916 1009 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 SLC9A5Q14940 896 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 RTP2Q5QGT7 225 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 DIEXFQ68CQ4 756 aaKnown RBP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 B4GALNT3Q6L9W6 998 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CCDC84Q86UT8 332 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 NLGN2Q8NFZ4 835 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CCDC97Q96F63 343 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 GORASP1Q9BQQ3 440 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 C11orf84Q9BUA3 381 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 PCDH18Q9HCL0 1135 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 KLHL3Q9UH77 587 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 SERPINA10Q9UK55 444 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 MINPP1Q9UNW1 487 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 SPG7Q9UQ90 795 aa2.16□□□□□ -2.06
RNU6-1239P-201ENST00000391310 DNAJA2O60884 412 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 HTR3BO95264 441 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 FBLP22087 321 aaKnown RBP2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PPP2CBP62714 309 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PPP2CAP67775 309 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 RAD51AP2Q09MP3 1159 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PRR31Q5SQ13 230 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 SLFN13Q68D06 897 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 ALG1LQ6GMV1 187 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 CYP2R1Q6VVX0 501 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 GLCCI1Q86VQ1 547 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 TTLL6Q8N841 843 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 NAT16Q8N8M0 369 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 KYQ8NBH2 561 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 Q8TCH9 128 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 JARID2Q92833 1246 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 DDX11Q96FC9 970 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PEX11GQ96HA9 241 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 BCAS3Q9H6U6 928 aa2.15□□□□□ -2.07
RNU6-1239P-201ENST00000391310 FAM221AA4D161 298 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 CARNS1A5YM72 827 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 DDX3XO00571 662 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PPP1R15AO75807 674 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 ZBTB7AO95365 584 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 BPNT1O95861 308 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 C8BP07358 591 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 ITGB6P18564 788 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 TACR1P25103 407 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 POU4F1Q01851 419 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PRKD1Q15139 912 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 HS1BP3Q53T59 392 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 PKN3Q6P5Z2 889 aa2.14□□□□□ -2.07
RNU6-1239P-201ENST00000391310 CRTC3Q6UUV7 619 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms