RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 TNKSO95271 1327 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
TRAV18-201ENST00000390446 SMPD1P17405 629 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 KCNA5P22460 613 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 RFC2P35250 354 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 BRDTQ58F21 947 aaPredicted RBP11.65□□□□□ -0.54
TRAV18-201ENST00000390446 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 GDPD5Q8WTR4 605 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 FEM1BQ9UK73 627 aa11.65□□□□□ -0.54
TRAV18-201ENST00000390446 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
TRAV18-201ENST00000390446 ASTN1O14525 1302 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 GRIN2DO15399 1336 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 NDUFB10O96000 172 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 NHLH1Q02575 133 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 BFSP2Q13515 415 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 PTCRAQ6ISU1 281 aaPredicted RBP11.64□□□□□ -0.55
TRAV18-201ENST00000390446 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
TRAV18-201ENST00000390446 CHMP4CQ96CF2 233 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 UBE2ZQ9H832 354 aaPredicted RBP11.64□□□□□ -0.55
TRAV18-201ENST00000390446 SLC38A10Q9HBR0 1119 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 PDGFCQ9NRA1 345 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
TRAV18-201ENST00000390446 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
TRAV18-201ENST00000390446 MINDY4BA8MYZ0 360 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 ALAS1P13196 640 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 PTGS1P23219 599 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 OAZ1P54368 228 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 NKX3-2P78367 333 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 HSP90AB4PQ58FF6 505 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 ITPRIPQ8IWB1 547 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 FBXO16Q8IX29 292 aaPredicted RBP11.63□□□□□ -0.55
TRAV18-201ENST00000390446 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
TRAV18-201ENST00000390446 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
TRAV18-201ENST00000390446 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
TRAV18-201ENST00000390446 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 RNF146Q9NTX7 359 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 Q9Y3F1 56 aa11.63□□□□□ -0.55
TRAV18-201ENST00000390446 MYH8P13535 1937 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 SOWAHBA6NEL2 793 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 DCXO43602 365 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 BAIAP3O94812 1187 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 IQCF3P0C7M6 154 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 IL9P15248 144 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 CPT1AP50416 773 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
TRAV18-201ENST00000390446 LEXMQ3ZCV2 418 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAV18-201ENST00000390446 FGD4Q96M96 766 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 MTG1Q9BT17 334 aaPredicted RBP11.62□□□□□ -0.55
TRAV18-201ENST00000390446 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 ARPP21Q9UBL0 812 aaPredicted RBP11.62□□□□□ -0.55
TRAV18-201ENST00000390446 FAM50BQ9Y247 325 aa11.62□□□□□ -0.55
TRAV18-201ENST00000390446 RAD50Q92878 1312 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 ARHGEF15O94989 841 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 FDX1P10109 184 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 BMP3P12645 472 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 SLFN13Q68D06 897 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 ZSCAN25Q6NSZ9 544 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 FAM117BQ6P1L5 589 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 FAM133AQ8N9E0 248 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 OR6J1Q8NGC5 347 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 PPP1R13LQ8WUF5 828 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 CHURC1Q8WUH1 139 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
TRAV18-201ENST00000390446 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
TRAV18-201ENST00000390446 A1CFQ9NQ94 594 aaKnown RBP11.61□□□□□ -0.55
TRAV18-201ENST00000390446 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
TRAV18-201ENST00000390446 PRRC2BQ5JSZ5 2229 aaKnown RBP11.61□□□□□ -0.55
TRAV18-201ENST00000390446 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 LPXNO60711 386 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 ADD2P35612 726 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 STAT2P52630 851 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
TRAV18-201ENST00000390446 LRRC47Q8N1G4 583 aaKnown RBP11.6□□□□□ -0.55
TRAV18-201ENST00000390446 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.6□□□□□ -0.55
TRAV18-201ENST00000390446 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
TRAV18-201ENST00000390446 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms