RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 SFMBT2Q5VUG0 894 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
PKP4-201ENST00000389757 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
PKP4-201ENST00000389757 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 UBL4BQ8N7F7 174 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 IPO4Q8TEX9 1081 aaKnown RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 RFX1P22670 979 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 TERF1P54274 439 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 LRMPQ12912 555 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 ODR4Q5SWX8 454 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 DCAF4Q8WV16 495 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 AK8Q96MA6 479 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 ZHX2Q9Y6X8 837 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 PNMA6FA0A0J9YX94 578 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 EXOC8Q8IYI6 725 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 JAKMIP2Q96AA8 810 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 PCDHA7Q9UN72 937 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 TRIML1Q8N9V2 468 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 STMN4Q9H169 189 aaPredicted RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 FAM204AQ9H8W3 233 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 AKT3Q9Y243 479 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 SLU7O95391 586 aaKnown RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 MAGEA1P43355 309 aa11.35□□□□□ -0.59
PKP4-201ENST00000389757 FAM207AQ9NSI2 230 aaPredicted RBP11.35□□□□□ -0.59
PKP4-201ENST00000389757 NEXMIFQ5QGS0 1516 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 DIP2AQ14689 1571 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 RPS6KC1Q96S38 1066 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 METTL14Q9HCE5 456 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 C1orf112Q9NSG2 853 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 LMBRD1Q9NUN5 540 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 SYT10Q6XYQ8 523 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 ANKFY1Q9P2R3 1169 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 CEP170BQ9Y4F5 1589 aaPredicted RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 E7EVH7 732 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 CYP2D6P10635 497 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 PRR5LQ6MZQ0 368 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 PRKAG2Q9UGJ0 569 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 FRMPD1Q5SYB0 1578 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 STK10O94804 968 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 RPN1P04843 607 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 CCDC26Q8TAB7 109 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 MMS19Q96T76 1030 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
PKP4-201ENST00000389757 ZC3H13Q5T200 1668 aaKnown RBP11.34□□□□□ -0.59
PKP4-201ENST00000389757 ZNF75DP51815 510 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 VAV2P52735 878 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 MED10Q9BTT4 135 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.59
PKP4-201ENST00000389757 RBSNQ9H1K0 784 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 NLRC4Q9NPP4 1024 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 USTQ9Y2C2 406 aa11.33□□□□□ -0.59
PKP4-201ENST00000389757 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 XPOTO43592 962 aaKnown RBP11.33□□□□□ -0.6
PKP4-201ENST00000389757 MORC3Q14149 939 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 SLC39A14Q15043 492 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 HS1BP3Q53T59 392 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 SPECC1LQ69YQ0 1117 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 RRAGAQ7L523 313 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 POMGNT1Q8WZA1 660 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 NACC1Q96RE7 527 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
PKP4-201ENST00000389757 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 ST7Q9NRC1 585 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 ZNRF3Q9ULT6 936 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 CD2APQ9Y5K6 639 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 UTYO14607 1347 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
PKP4-201ENST00000389757 HNRNPDLO14979 420 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms