RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 GDF3Q9NR23 364 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.26
CTNS-202ENST00000381870 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 PRDM1O75626 825 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 HEXIM1O94992 359 aaKnown RBP16.64■□□□□ 0.25
CTNS-202ENST00000381870 SRGNP10124 158 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 TCP1P17987 556 aaKnown RBP16.64■□□□□ 0.25
CTNS-202ENST00000381870 ZBED6P86452 979 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 SPA17Q15506 151 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 ACCSLQ4AC99 568 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 MAATS1Q7Z4T9 603 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 CCDC50Q8IVM0 306 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
CTNS-202ENST00000381870 MAGEC3Q8TD91 643 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 CCDC42Q96M95 316 aa16.64■□□□□ 0.25
CTNS-202ENST00000381870 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
CTNS-202ENST00000381870 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.25
CTNS-202ENST00000381870 IDH1O75874 414 aaKnown RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 SCTRP47872 440 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PTGDRQ13258 359 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 C11orf91Q3C1V1 193 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 EXOC1Q9NV70 894 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PCDHA13Q9Y5I0 950 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 GMNCA6NCL1 334 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 HMGB1P1B2RPK0 211 aaPredicted RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 DNM2P50570 870 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PPP4R3AQ6IN85 833 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 RNF217Q8TC41 542 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PIH1D3Q9NQM4 214 aaKnown RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PLAAQ9Y263 795 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 PARP4Q9UKK3 1724 aaKnown RBP16.63■□□□□ 0.25
CTNS-202ENST00000381870 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
CTNS-202ENST00000381870 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
CTNS-202ENST00000381870 ZPR1O75312 459 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 PAK2Q13177 524 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 BIRC2Q13490 618 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 GLE1Q53GS7 698 aaKnown RBP16.62■□□□□ 0.25
CTNS-202ENST00000381870 TYW1BQ6NUM6 668 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
CTNS-202ENST00000381870 MYH10P35580 1976 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 SLIT3O75094 1523 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
CTNS-202ENST00000381870 TMOD1P28289 359 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 KRT2P35908 639 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 BYSLQ13895 437 aaKnown RBP16.62■□□□□ 0.25
CTNS-202ENST00000381870 WTAPQ15007 396 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 TTLL7Q6ZT98 887 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 CASKIN2Q8WXE0 1202 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 TBC1D31Q96DN5 1066 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 SEC16BQ96JE7 1060 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 TUBGCP2Q9BSJ2 902 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 TLR10Q9BXR5 811 aa16.62■□□□□ 0.25
CTNS-202ENST00000381870 NID2Q14112 1375 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 IL17AQ16552 155 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 MREGQ8N565 214 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
CTNS-202ENST00000381870 KIF3CO14782 793 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTNS-202ENST00000381870 SLC8A1P32418 973 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 DNA2P51530 1060 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 INHBEP58166 350 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 TTC38Q5R3I4 469 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 OR2W6PQ8NHA6 318 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 RMND1Q9NWS8 449 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
CTNS-202ENST00000381870 SRRM3A6NNA2 597 aaPredicted RBP16.6■□□□□ 0.25
CTNS-202ENST00000381870 TRAPPC3O43617 180 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 MGRN1O60291 552 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 IRX1P78414 480 aaPredicted RBP16.6■□□□□ 0.25
CTNS-202ENST00000381870 XRCC4Q13426 336 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 ALS2CR12Q96Q35 445 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 STRBPQ96SI9 672 aaKnown RBP16.6■□□□□ 0.25
CTNS-202ENST00000381870 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 NUP58Q9BVL2 599 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 MYH7P12883 1935 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 ATP2C1P98194 919 aaPredicted RBP16.6■□□□□ 0.25
CTNS-202ENST00000381870 GRIK3Q13003 919 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 PKN1Q16512 942 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms