RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SYDE2Q5VT97 1194 aa16.69■□□□□ 0.26
SHOX-202ENST00000381575 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
SHOX-202ENST00000381575 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
SHOX-202ENST00000381575 EEPD1Q7L9B9 569 aa16.69■□□□□ 0.26
SHOX-202ENST00000381575 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
SHOX-202ENST00000381575 ASGR1P07306 291 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 EPHB4P54760 987 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 TKFCQ3LXA3 575 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 TMEM63BQ5T3F8 832 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 MFSD6Q6ZSS7 791 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
SHOX-202ENST00000381575 FBXO16Q8IX29 292 aaPredicted RBP16.68■□□□□ 0.26
SHOX-202ENST00000381575 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 TSEN34Q9BSV6 310 aaKnown RBP16.68■□□□□ 0.26
SHOX-202ENST00000381575 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
SHOX-202ENST00000381575 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
SHOX-202ENST00000381575 NFIBO00712 420 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 ICAM1P05362 532 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 PDHBP11177 359 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 FAAP100Q0VG06 881 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 AAMPQ13685 434 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
SHOX-202ENST00000381575 CPVLQ9H3G5 476 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 TMEM39AQ9NV64 488 aa16.67■□□□□ 0.26
SHOX-202ENST00000381575 MOXD2PA6NHM9 499 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 CTAGE5O15320 804 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 RAG1P15918 1043 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 CST5P28325 142 aaPredicted RBP16.66■□□□□ 0.26
SHOX-202ENST00000381575 GJA9P57773 515 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
SHOX-202ENST00000381575 TNFAIP2Q03169 654 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 GNASQ5JWF2 1037 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 SPC25Q9HBM1 224 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
SHOX-202ENST00000381575 ASB14A6NK59 587 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 DCDC2CA8MYV0 355 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 KIAA0355O15063 1070 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
SHOX-202ENST00000381575 ZNF543Q08ER8 600 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 BAATQ14032 418 aaPredicted RBP16.65■□□□□ 0.26
SHOX-202ENST00000381575 TLK2Q86UE8 772 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 GLT1D1Q96MS3 346 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 IL25Q9H293 177 aa16.65■□□□□ 0.26
SHOX-202ENST00000381575 SUPT16HQ9Y5B9 1047 aaKnown RBP16.65■□□□□ 0.26
SHOX-202ENST00000381575 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
SHOX-202ENST00000381575 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 SMPD1P17405 629 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 TICAM2Q86XR7 235 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.26
SHOX-202ENST00000381575 GUCD1Q96NT3 240 aa16.64■□□□□ 0.26
SHOX-202ENST00000381575 B4E1Z4 1266 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 ZNF213O14771 459 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 KDM4AO75164 1064 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 PDE4AP27815 886 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 CXCL17Q6UXB2 119 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 ESR2Q92731 530 aa16.64■□□□□ 0.25
SHOX-202ENST00000381575 RNPC3Q96LT9 517 aaKnown RBP16.64■□□□□ 0.25
SHOX-202ENST00000381575 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
SHOX-202ENST00000381575 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
SHOX-202ENST00000381575 A0A0U1RQG5 324 aaPredicted RBP16.63■□□□□ 0.25
SHOX-202ENST00000381575 DYNC1LI2O43237 492 aaPredicted RBP16.63■□□□□ 0.25
SHOX-202ENST00000381575 CALML3P27482 149 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 FPGSQ05932 587 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 FSCN1Q16658 493 aaKnown RBP16.63■□□□□ 0.25
SHOX-202ENST00000381575 USH1GQ495M9 461 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 TBX21Q9UL17 535 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
SHOX-202ENST00000381575 ELP1O95163 1332 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 CHD9Q3L8U1 2897 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 ARVCFO00192 962 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 SNHG28P0DPA3 235 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
SHOX-202ENST00000381575 CDK7P50613 346 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 ALDH5A1P51649 535 aaPredicted RBP16.62■□□□□ 0.25
SHOX-202ENST00000381575 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
SHOX-202ENST00000381575 GBF1Q92538 1859 aa16.61■□□□□ 0.25
SHOX-202ENST00000381575 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
SHOX-202ENST00000381575 PSMC6P62333 389 aa16.61■□□□□ 0.25
SHOX-202ENST00000381575 FAM126BQ8IXS8 530 aa16.61■□□□□ 0.25
SHOX-202ENST00000381575 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
SHOX-202ENST00000381575 TTC14Q96N46 770 aa16.61■□□□□ 0.25
SHOX-202ENST00000381575 VTA1Q9NP79 307 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms