RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SDSP20132 328 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 ACLYP53396 1101 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 GJA9P57773 515 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 AKNAD1Q5T1N1 836 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 FAM109BQ6ICB4 259 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-202ENST00000381208 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 DNAH12Q6ZR08 3092 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 ANKRD33Q7Z3H0 272 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-202ENST00000381208 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 ESR2Q92731 530 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 AGBL1Q96MI9 1066 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
RPAIN-202ENST00000381208 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 DIAPH3Q9NSV4 1193 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 CCPG1Q9ULG6 757 aa15.29■□□□□ 0.04
RPAIN-202ENST00000381208 NKX3-2P78367 333 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 KCNA10Q16322 511 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 SYDE2Q5VT97 1194 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 CCSAPQ6IQ19 270 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-202ENST00000381208 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 FGD4Q96M96 766 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 TMEM47Q9BQJ4 181 aa15.28■□□□□ 0.04
RPAIN-202ENST00000381208 RANBP17Q9H2T7 1088 aaKnown RBP15.28■□□□□ 0.04
RPAIN-202ENST00000381208 ADD3Q9UEY8 706 aaKnown RBP15.28■□□□□ 0.04
RPAIN-202ENST00000381208 ZNF213O14771 459 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 KIAA0355O15063 1070 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-202ENST00000381208 RAG1P15918 1043 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 CCDC174Q6PII3 467 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 BADQ92934 168 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 SEZ6LQ9BYH1 1024 aa15.27■□□□□ 0.04
RPAIN-202ENST00000381208 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 ZEB2O60315 1214 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 PQBP1O60828 265 aaKnown RBP15.26■□□□□ 0.03
RPAIN-202ENST00000381208 CABYRO75952 493 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 PDHBP11177 359 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 HAND2P61296 217 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 CNTN2Q02246 1040 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 GNASQ5JWF2 1037 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
RPAIN-202ENST00000381208 IQSEC1Q6DN90 963 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 DGKHQ86XP1 1220 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-202ENST00000381208 LENG1Q96BZ8 264 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-202ENST00000381208 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
RPAIN-202ENST00000381208 MAF1Q9H063 256 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 KATNBL1Q9H079 304 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 CYP39A1Q9NYL5 469 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 CTNNA3Q9UI47 895 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 Q9Y3F1 56 aa15.26■□□□□ 0.03
RPAIN-202ENST00000381208 A0A0U1RQG5 324 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-202ENST00000381208 IGHDP01880 384 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 LCE2DQ5TA82 110 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-202ENST00000381208 NSMFQ6X4W1 530 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
RPAIN-202ENST00000381208 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 DSCC1Q9BVC3 393 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 VTA1Q9NP79 307 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
RPAIN-202ENST00000381208 SOWAHBA6NEL2 793 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 B4DLN1 442 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 ASGR1P07306 291 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 SNHG28P0DPA3 235 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 MRPL12P52815 198 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 ZNF543Q08ER8 600 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 SH3RF1Q7Z6J0 888 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 EXOC6Q8TAG9 804 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 AP5M1Q9H0R1 490 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 MTMR10Q9NXD2 777 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 ARVCFO00192 962 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 CDK7P50613 346 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 FAAP100Q0VG06 881 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 SHHQ15465 462 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 IMMTQ16891 758 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 MUM1L1Q5H9M0 696 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 TTBK2Q6IQ55 1244 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 GPCPD1Q9NPB8 672 aa15.24■□□□□ 0.03
RPAIN-202ENST00000381208 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
RPAIN-202ENST00000381208 FRMPD2Q68DX3 1309 aaPredicted RBP15.23■□□□□ 0.03
RPAIN-202ENST00000381208 MYADML2A6NDP7 307 aa15.23■□□□□ 0.03
RPAIN-202ENST00000381208 SLC16A2P36021 539 aa15.23■□□□□ 0.03
RPAIN-202ENST00000381208 SNAP25P60880 206 aa15.23■□□□□ 0.03
RPAIN-202ENST00000381208 FPGSQ05932 587 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms