RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 KIRREL3Q8IZU9 778 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 FAM107BQ9H098 131 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 MMRN2Q9H8L6 949 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 IRAK1P51617 712 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 LRRC41Q15345 812 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 DDB1Q16531 1140 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 CENPHQ9H3R5 247 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 TXKP42681 527 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 TMED8Q6PL24 325 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 CCDC155Q8N6L0 562 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 GTPBP6O43824 516 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 BIRC2Q13490 618 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 EZH2Q15910 746 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 SH3RF1Q7Z6J0 888 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 IRF2BP1Q8IU81 584 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 CLEC10AQ8IUN9 316 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 BAZ2AQ9UIF9 1905 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-202ENST00000380281 NTSR2O95665 410 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 TSPY3P0CV98 308 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 TSPY8P0CW00 308 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 USP17L2Q6R6M4 530 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 CABS1Q96KC9 395 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 ELF1P32519 619 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 PBX1P40424 430 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 STK4Q13043 487 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 GRIK5Q16478 980 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 TICAM2Q86XR7 235 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 RDXP35241 583 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 CRACR2AQ9BSW2 395 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 MLXIPQ9HAP2 919 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 HPCAL4Q9UM19 191 aa13.87□□□□□ -0.19
PRPF40B-202ENST00000380281 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 BUB1O43683 1085 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 PLCG1P19174 1290 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 NAPAP54920 295 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 ZNF444Q8N0Y2 327 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 MB21D1Q8N884 522 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 ZKSCAN4Q969J2 545 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 NOC4LQ9BVI4 516 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 ZNHIT6Q9NWK9 470 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 LRWD1Q9UFC0 647 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 RWDD2AQ9UIY3 292 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 F8W031 263 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 PSMA7O14818 248 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 NCK2O43639 380 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 MYO1BO43795 1136 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 C4AP0C0L4 1744 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 C4BP0C0L5 1744 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 SLURP2P0DP57 97 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 MYBL2P10244 700 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 PDE6BP35913 854 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 TXNRD1Q16881 649 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 FAM43BQ6ZT52 329 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 DNAAF5Q86Y56 855 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 PRPF38AQ8NAV1 312 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 SAR1BQ9Y6B6 198 aa13.86□□□□□ -0.19
PRPF40B-202ENST00000380281 GOLGA6CA6NDK9 693 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 GOLGA6DP0CG33 693 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 GNGT1P63211 74 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 STIM1Q13586 685 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms