RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 RTN1Q16799 776 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 DENND2CQ68D51 928 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 MDM1Q8TC05 714 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 HSD3B7Q9H2F3 369 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 TBC1D2BQ9UPU7 963 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 B4E1Z4 1266 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 LGR5O75473 907 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-202ENST00000379237 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
USP6NL-202ENST00000379237 KRT13P13646 458 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 CNGA1P29973 690 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 AMPD2Q01433 879 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 RPS6KA1Q15418 735 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 TRPM8Q7Z2W7 1104 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 ZC3H18Q86VM9 953 aaKnown RBP12.03□□□□□ -0.48
USP6NL-202ENST00000379237 TEX9Q8N6V9 391 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 FAM81AQ8TBF8 368 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 MAP3K19Q56UN5 1328 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 RAB27AP51159 221 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 SPATA21Q7Z572 469 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 MAGEC3Q8TD91 643 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 DBNLQ9UJU6 430 aaKnown RBP12.03□□□□□ -0.48
USP6NL-202ENST00000379237 ABCC1P33527 1531 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 H7C1D1 291 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 DTNBP1Q96EV8 351 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 C2CD2Q9Y426 696 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 PCDHA13Q9Y5I0 950 aa12.03□□□□□ -0.48
USP6NL-202ENST00000379237 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.48
USP6NL-202ENST00000379237 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.48
USP6NL-202ENST00000379237 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.48
USP6NL-202ENST00000379237 PRCCQ92733 491 aaPredicted RBP12.02□□□□□ -0.48
USP6NL-202ENST00000379237 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.48
USP6NL-202ENST00000379237 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.48
USP6NL-202ENST00000379237 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.48
USP6NL-202ENST00000379237 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.48
USP6NL-202ENST00000379237 SEMA3EO15041 775 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 SKIP12755 728 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 SLCO1A2P46721 670 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 TMED1Q13445 227 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 TCERG1LQ5VWI1 586 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 TAOK1Q7L7X3 1001 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 MB21D1Q8N884 522 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 MAB21L3Q8N8X9 362 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 PYM1Q9BRP8 204 aaKnown RBP12.02□□□□□ -0.49
USP6NL-202ENST00000379237 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
USP6NL-202ENST00000379237 IQGAP3Q86VI3 1631 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 ZSCAN5CA6NGD5 496 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-202ENST00000379237 RTN3O95197 1032 aaPredicted RBP12.02□□□□□ -0.49
USP6NL-202ENST00000379237 ZNF131P52739 623 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 CWF19L1Q69YN2 538 aaKnown RBP12.02□□□□□ -0.49
USP6NL-202ENST00000379237 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 ETNK1Q9HBU6 452 aa12.02□□□□□ -0.49
USP6NL-202ENST00000379237 A0A087WZG4 1122 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 FAM153BP0C7A2 387 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NQO1P15559 274 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 FAM153CQ494X1 144 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NAPBQ9H115 298 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 RMI1Q9H9A7 625 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 FAM153AQ9UHL3 310 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NPATQ14207 1427 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 KRIT1O00522 736 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 PTCD1O75127 700 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 BMP15O95972 392 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ALDH3A1P30838 453 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 PAGE5Q96GU1 130 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 TUBGCP2Q9BSJ2 902 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 TAOK3Q9H2K8 898 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ANAPC4Q9UJX5 808 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 GSTTP1A0A1W2PQM5 241 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 MCM7P33993 719 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 EYA1Q99502 592 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 FBXL5Q9UKA1 691 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 BMP6P22004 513 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ZBED6P86452 979 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 XRCC4Q13426 336 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 RUBCNQ92622 972 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 GGA2Q9UJY4 613 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms