RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 A0A0D9SFI3 127 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 ELF1P32519 619 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
LINC00654-201ENST00000379053 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
LINC00654-201ENST00000379053 AOC3Q16853 763 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 EXOC4Q96A65 974 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 STAT2P52630 851 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 GBP6Q6ZN66 633 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 BBS5Q8N3I7 341 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 PARD3BQ8TEW8 1205 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 SNX25Q9H3E2 840 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 PI4KBQ9UBF8 816 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 SLC16A2P36021 539 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 HHATQ5VTY9 493 aa12□□□□□ -0.49
LINC00654-201ENST00000379053 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
LINC00654-201ENST00000379053 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00654-201ENST00000379053 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 KRT15P19012 456 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 MYSM1Q5VVJ2 828 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ATP2A3Q93084 1043 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ANKRD36BP1Q96IX9 119 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PPP2R3AQ06190 1150 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 GRAPQ13588 217 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 VPS18Q9P253 973 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 TBC1D8O95759 1140 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 RPUSD2Q8IZ73 545 aaKnown RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 GJA10Q969M2 543 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 GJD4Q96KN9 370 aaPredicted RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 GCNAQ96QF7 691 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ARHGEF12Q9NZN5 1544 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 TCOF1Q13428 1488 aaKnown RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 RNF8O76064 485 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PSMD6Q15008 389 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 FEZ2Q9UHY8 353 aaPredicted RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PEG3Q9GZU2 1588 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 ARHGEF37A1IGU5 675 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 I3L4J1 428 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
LINC00654-201ENST00000379053 CAPN2P17655 700 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 PNOCQ13519 176 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 IFT20Q8IY31 132 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
LINC00654-201ENST00000379053 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
LINC00654-201ENST00000379053 FAM76AQ8TAV0 307 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 CEP170P1Q96L14 293 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 LMCD1Q9NZU5 365 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 AMFRQ9UKV5 643 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 SATB1Q01826 763 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 SLITRK6Q9H5Y7 841 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 A6NJR5 290 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 IGSF3O75054 1194 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 CIAO1O76071 339 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 MYL3P08590 195 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 IFIH1Q9BYX4 1025 aaKnown RBP11.98□□□□□ -0.49
LINC00654-201ENST00000379053 ADAM9Q13443 819 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 STMN2Q93045 179 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 IQCDQ96DY2 449 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 SLF1Q9BQI6 1058 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 METTL14Q9HCE5 456 aaKnown RBP11.98□□□□□ -0.49
LINC00654-201ENST00000379053 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
LINC00654-201ENST00000379053 WDR46O15213 610 aaKnown RBP11.97□□□□□ -0.49
LINC00654-201ENST00000379053 RPS6KA2Q15349 733 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 ADALQ6DHV7 355 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 COA1Q9GZY4 146 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 KMT5AQ9NQR1 393 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 GANCQ8TET4 914 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 SLC39A2Q9NP94 309 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 SLC12A6Q9UHW9 1150 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 ZBBXA8MT70 800 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 EBAG9O00559 213 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 NSFP46459 744 aaKnown RBP11.97□□□□□ -0.49
LINC00654-201ENST00000379053 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 PIGBQ92521 554 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 POLIQ9UNA4 740 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 EVCP57679 992 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms