RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 KRT25Q7Z3Z0 450 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 CEP112Q8N8E3 955 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 NEDD1Q8NHV4 660 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 EEF2KMTQ96G04 330 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 NAPGQ99747 312 aaPredicted RBP21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 CD209Q9NNX6 404 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 ONECUT3O60422 494 aaPredicted RBP21.89■■□□□ 1.1
SHROOM1-202ENST00000378676 UFL1O94874 794 aa21.89■■□□□ 1.1
SHROOM1-202ENST00000378676 STIM1Q13586 685 aa21.89■■□□□ 1.1
SHROOM1-202ENST00000378676 CEP95Q96GE4 821 aa21.89■■□□□ 1.1
SHROOM1-202ENST00000378676 ARFGAP3Q9NP61 516 aa21.89■■□□□ 1.1
SHROOM1-202ENST00000378676 GPR75-ASB3A0A0A6YYF3 556 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 A0A1W2PQC6 194 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 B4DLN1 442 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 NDUFA10O95299 355 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 PIGSQ96S52 555 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 DNAJC7Q99615 494 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 FUT8Q9BYC5 575 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 TRIM9Q9C026 710 aa21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 EPN1Q9Y6I3 576 aaPredicted RBP21.89■■□□□ 1.09
SHROOM1-202ENST00000378676 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 WDR59Q6PJI9 974 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 PNKPQ96T60 521 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 VAT1LQ9HCJ6 419 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 KLK7P49862 253 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 RHBDL3P58872 404 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 PDE4DQ08499 809 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 TRAPPC3LQ5T215 181 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 OR8K1Q8NGG5 319 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 MMTAG2Q9BU76 263 aaKnown RBP21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 TFR2Q9UP52 801 aa21.88■■□□□ 1.09
SHROOM1-202ENST00000378676 POLR3GO15318 223 aaPredicted RBP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 FCER1AP12319 257 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 HERVK_113P62684 666 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 STK4Q13043 487 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 FAM196AQ6ZSG2 479 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 NEK8Q86SG6 692 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 RRP36Q96EU6 259 aaKnown RBP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 AK8Q96MA6 479 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 CUEDC2Q9H467 287 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 C6orf50Q9HD87 102 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 MAGEC2Q9UBF1 373 aaPredicted RBP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 CAPN11Q9UMQ6 739 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 LUC7L2Q9Y383 392 aaKnown RBP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 CCDC151A5D8V7 595 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 NKRFO15226 690 aaKnown RBP eCLIP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 TECP42680 631 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 ASIC1P78348 528 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 AMPD2Q01433 879 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 LONRF2Q1L5Z9 754 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 JAKMIP3Q5VZ66 844 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 POTEDQ86YR6 584 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 CSGALNACT2Q8N6G5 542 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 TBCKQ8TEA7 893 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 P2RX5Q93086 422 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 DHTKD1Q96HY7 919 aaPredicted RBP21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 MAGEF1Q9HAY2 307 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 ZNF287Q9HBT7 754 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 MYO1AQ9UBC5 1043 aa21.87■■□□□ 1.09
SHROOM1-202ENST00000378676 RASSF10A6NK89 507 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 USP17L5A8MUK1 530 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 OAS2P29728 719 aaKnown RBP21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 ANKRD40Q6AI12 368 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 MSANTD4Q8NCY6 345 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 HPS3Q969F9 1004 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 TUBGCP2Q9BSJ2 902 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 TTYH3Q9C0H2 523 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 EXOC1Q9NV70 894 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 BIN2Q9UBW5 565 aaPredicted RBP21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
SHROOM1-202ENST00000378676 SRGNP10124 158 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 IL1R1P14778 569 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 CCNE1P24864 410 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 TUBB2AQ13885 445 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 CNOT6LQ96LI5 555 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 C7orf25Q9BPX7 421 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 TUBB2BQ9BVA1 445 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 GUCA1BQ9UMX6 200 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 DNM2P50570 870 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 BRD3Q15059 726 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 NOC3LQ8WTT2 800 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 SEC63Q9UGP8 760 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 ADAMTSL1Q8N6G6 1762 aa21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 FRMPD2Q68DX3 1309 aaPredicted RBP21.85■■□□□ 1.09
SHROOM1-202ENST00000378676 GNA11P29992 359 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 SOGA3Q5TF21 947 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 AGPAT5Q9NUQ2 364 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 ARFGEF1Q9Y6D6 1849 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 MYH7BA7E2Y1 1941 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 SEMA3FQ13275 785 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 SMC1AQ14683 1233 aaKnown RBP21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 WHAMMP3Q1A5X7 153 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 MFSD14BQ5SR56 506 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 KIAA0895Q8NCT3 520 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 ZCCHC17Q9NP64 241 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms