RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 KANSL2Q9H9L4 492 aa17.26■□□□□ 0.35
RER1-203ENST00000378513 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
RER1-203ENST00000378513 UTRNP46939 3433 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 MTIF2P46199 727 aaKnown RBP17.25■□□□□ 0.35
RER1-203ENST00000378513 SBK1Q52WX2 424 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 TUBGCP2Q9BSJ2 902 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
RER1-203ENST00000378513 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
RER1-203ENST00000378513 FAM170AA1A519 330 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 LRRC10BA6NIK2 292 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 IDEP14735 1019 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 HERVK_113P62684 666 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 SLC10A5Q5PT55 438 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 DGKHQ86XP1 1220 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 TEX11Q8IYF3 940 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 CCDC155Q8N6L0 562 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 DUSP9Q99956 384 aaKnown RBP17.25■□□□□ 0.35
RER1-203ENST00000378513 RMND1Q9NWS8 449 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
RER1-203ENST00000378513 POTEMA6NI47 508 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 PSMA7O14818 248 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 UFL1O94874 794 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 CDK8P49336 464 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 ZSCAN26Q16670 478 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 OR8K1Q8NGG5 319 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
RER1-203ENST00000378513 VPS18Q9P253 973 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
RER1-203ENST00000378513 CTAGE15A4D2H0 777 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 M0R2N6 131 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 CTAGE8P0CG41 777 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
RER1-203ENST00000378513 RFC4P35249 363 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
RER1-203ENST00000378513 CTAGE6Q86UF2 777 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 CTAGE4Q8IX94 777 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
RER1-203ENST00000378513 LGALS16A8MUM7 142 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 SEMA3EO15041 775 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 DNA2P51530 1060 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 GPSM2P81274 684 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 GPS2Q13227 327 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 CNOT6LQ96LI5 555 aaKnown RBP17.23■□□□□ 0.35
RER1-203ENST00000378513 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
RER1-203ENST00000378513 MYO6Q9UM54 1294 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 H7C1D1 291 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 EPHB6O15197 1021 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 TDP2O95551 362 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 SPAG1Q07617 926 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 MMS19Q96T76 1030 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 TCP11L1Q9NUJ3 509 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 EXOC1Q9NV70 894 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 SMARCAL1Q9NZC9 954 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 TBC1D7Q9P0N9 293 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 RSPH14Q9UHP6 348 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
RER1-203ENST00000378513 AMOTL1Q8IY63 956 aa17.23■□□□□ 0.35
RER1-203ENST00000378513 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
RER1-203ENST00000378513 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 UBE2SQ16763 222 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 BEND6Q5SZJ8 279 aaPredicted RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 TRIM9Q9C026 710 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 ITIH6Q6UXX5 1313 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 BAG3O95817 575 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 SSBP05455 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
RER1-203ENST00000378513 SLC16A2P36021 539 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 FAM196AQ6ZSG2 479 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 CEP112Q8N8E3 955 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
RER1-203ENST00000378513 KBTBD4Q9NVX7 518 aa17.22■□□□□ 0.35
RER1-203ENST00000378513 SLC37A4O43826 429 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 MATR3P43243 847 aaKnown RBP eCLIP17.21■□□□□ 0.35
RER1-203ENST00000378513 STIM1Q13586 685 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
RER1-203ENST00000378513 FLT1P17948 1338 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 APBA1Q02410 837 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■■■□ 21.6
RER1-203ENST00000378513 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
RER1-203ENST00000378513 MMTAG2Q9BU76 263 aaKnown RBP17.21■□□□□ 0.35
RER1-203ENST00000378513 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms