RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MAFAQ8NHW3 353 aaPredicted RBP22.68■■□□□ 1.22
CBWD3-204ENST00000377349 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.22
CBWD3-204ENST00000377349 ANAPC4Q9UJX5 808 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 GNEQ9Y223 722 aaKnown RBP22.68■■□□□ 1.22
CBWD3-204ENST00000377349 MROH7Q68CQ1 1323 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 TMEM265A0A087WTH1 108 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 ARVCFO00192 962 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 TKFCQ3LXA3 575 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 MUM1L1Q5H9M0 696 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 RCSD1Q6JBY9 416 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 MFSD5Q6N075 450 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 TRERF1Q96PN7 1200 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 PRR12Q9ULL5 1215 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 STX8Q9UNK0 236 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
CBWD3-204ENST00000377349 NCOR1O75376 2440 aa22.67■■□□□ 1.22
CBWD3-204ENST00000377349 A0A0U1RQG5 324 aaPredicted RBP22.66■■□□□ 1.22
CBWD3-204ENST00000377349 TSPY2A6NKD2 308 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 FGRP09769 529 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 BEX3Q00994 111 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 AAMPQ13685 434 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 SPC25Q9HBM1 224 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 REV3LO60673 3130 aa22.66■■□□□ 1.22
CBWD3-204ENST00000377349 CD4P01730 458 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 ALAS1P13196 640 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
CBWD3-204ENST00000377349 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 CCDC174Q6PII3 467 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 SLC43A3Q8NBI5 491 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 CYP39A1Q9NYL5 469 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 ORC4O43929 436 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 IGHDP01880 384 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 DNAJB2P25686 324 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 TNFAIP2Q03169 654 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 IKQ13123 557 aaPredicted RBP22.65■■□□□ 1.22
CBWD3-204ENST00000377349 PPP4R3BQ5MIZ7 849 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 TMEM240Q5SV17 173 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 FAM227BQ96M60 508 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 TOMM22Q9NS69 142 aa22.65■■□□□ 1.22
CBWD3-204ENST00000377349 SCN10AQ9Y5Y9 1956 aa22.64■■□□□ 1.22
CBWD3-204ENST00000377349 LAMA4Q16363 1823 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 MYH6P13533 1939 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.64■■□□□ 1.21
CBWD3-204ENST00000377349 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.64■■□□□ 1.21
CBWD3-204ENST00000377349 ASB14A6NK59 587 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 CSF2RAP15509 400 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 SMPD1P17405 629 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 ALX1Q15699 326 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 TMEM63BQ5T3F8 832 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 TAPT1Q6NXT6 567 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 TLK2Q86UE8 772 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 CHD1LQ86WJ1 897 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 PURBQ96QR8 312 aaKnown RBP22.64■■□□□ 1.21
CBWD3-204ENST00000377349 PDGFCQ9NRA1 345 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 SCN5AQ14524 2016 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 GRIN2DO15399 1336 aa22.64■■□□□ 1.21
CBWD3-204ENST00000377349 A0A0D9SFI3 127 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 FOSL2P15408 326 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 GRIN2CQ14957 1233 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 CXCL17Q6UXB2 119 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 MORC4Q8TE76 937 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 VTI1AQ96AJ9 217 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 MTMR7Q9Y216 660 aa22.63■■□□□ 1.21
CBWD3-204ENST00000377349 RANBP6O60518 1105 aaKnown RBP22.62■■□□□ 1.21
CBWD3-204ENST00000377349 NMIQ13287 307 aaPredicted RBP22.62■■□□□ 1.21
CBWD3-204ENST00000377349 PPIGQ13427 754 aaKnown RBP eCLIP22.62■■□□□ 1.21
CBWD3-204ENST00000377349 TTBK2Q6IQ55 1244 aa22.62■■□□□ 1.21
CBWD3-204ENST00000377349 FBXO16Q8IX29 292 aaPredicted RBP22.62■■□□□ 1.21
CBWD3-204ENST00000377349 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
CBWD3-204ENST00000377349 RANBP17Q9H2T7 1088 aaKnown RBP22.62■■□□□ 1.21
CBWD3-204ENST00000377349 HELLSQ9NRZ9 838 aa22.62■■□□□ 1.21
CBWD3-204ENST00000377349 ICAM1P05362 532 aa22.61■■□□□ 1.21
CBWD3-204ENST00000377349 FSCN1Q16658 493 aaKnown RBP22.61■■□□□ 1.21
CBWD3-204ENST00000377349 RRP12Q5JTH9 1297 aaKnown RBP22.61■■□□□ 1.21
CBWD3-204ENST00000377349 BTNL9Q6UXG8 535 aa22.61■■□□□ 1.21
CBWD3-204ENST00000377349 DCAF4Q8WV16 495 aa22.61■■□□□ 1.21
CBWD3-204ENST00000377349 PPP1R12CQ9BZL4 782 aa22.61■■□□□ 1.21
CBWD3-204ENST00000377349 CCPG1Q9ULG6 757 aa22.61■■□□□ 1.21
CBWD3-204ENST00000377349 FGAP02671 866 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 ACRP10323 421 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 SLC16A2P36021 539 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 MCMDC2Q4G0Z9 681 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 EEPD1Q7L9B9 569 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 UMODL1Q5DID0 1318 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 TRANK1O15050 2925 aa22.6■■□□□ 1.21
CBWD3-204ENST00000377349 TRIP12Q14669 1992 aaPredicted RBP22.6■■□□□ 1.21
CBWD3-204ENST00000377349 GRXCR1A8MXD5 290 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 CYP2C18P33260 490 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 PBX2P40425 430 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 NSMFQ6X4W1 530 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 ZNF365Q70YC5 407 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 NOL8Q76FK4 1167 aaKnown RBP22.59■■□□□ 1.21
CBWD3-204ENST00000377349 TMEM199Q8N511 208 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 TIFAQ96CG3 184 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 TMEM47Q9BQJ4 181 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 PBX4Q9BYU1 374 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 ZNF576Q9H609 170 aa22.59■■□□□ 1.21
CBWD3-204ENST00000377349 TET1Q8NFU7 2136 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 ZMYM6O95789 1325 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 TLR3O15455 904 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms