RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FGAP02671 866 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
HDAC6-204ENST00000376643 MRPL12P52815 198 aaKnown RBP17.37■□□□□ 0.37
HDAC6-204ENST00000376643 FAAP100Q0VG06 881 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 RRP12Q5JTH9 1297 aaKnown RBP17.37■□□□□ 0.37
HDAC6-204ENST00000376643 C9orf50Q5SZB4 431 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
HDAC6-204ENST00000376643 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
HDAC6-204ENST00000376643 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 NMT2O60551 498 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 CNTN2Q02246 1040 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 NSMFQ6X4W1 530 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 ESR2Q92731 530 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 MAF1Q9H063 256 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 KATNBL1Q9H079 304 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 MTIF3Q9H2K0 278 aaKnown RBP17.36■□□□□ 0.37
HDAC6-204ENST00000376643 TBX21Q9UL17 535 aa17.36■□□□□ 0.37
HDAC6-204ENST00000376643 A0A0D9SFI3 127 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 CDK7P50613 346 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
HDAC6-204ENST00000376643 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 FAM227BQ96M60 508 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 GUCD1Q96NT3 240 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 MTMR7Q9Y216 660 aa17.35■□□□□ 0.37
HDAC6-204ENST00000376643 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 MYADML2A6NDP7 307 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 SOWAHBA6NEL2 793 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 FSCN1Q16658 493 aaKnown RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 BRDTQ58F21 947 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 IQCA1Q86XH1 822 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 WDR19Q8NEZ3 1342 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 MORC4Q8TE76 937 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 RAD50Q92878 1312 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 OSBPL3Q9H4L5 887 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 DIAPH3Q9NSV4 1193 aa17.34■□□□□ 0.37
HDAC6-204ENST00000376643 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
HDAC6-204ENST00000376643 ZNF213O14771 459 aa17.33■□□□□ 0.36
HDAC6-204ENST00000376643 CHD1LQ86WJ1 897 aa17.33■□□□□ 0.36
HDAC6-204ENST00000376643 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.36
HDAC6-204ENST00000376643 SEMA6BQ9H3T3 888 aa17.33■□□□□ 0.36
HDAC6-204ENST00000376643 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.36
HDAC6-204ENST00000376643 PDHBP11177 359 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 SDSP20132 328 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 ITGB8P26012 769 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 MUM1L1Q5H9M0 696 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 FAM161BQ96MY7 647 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
HDAC6-204ENST00000376643 PTPDC1A2A3K4 754 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 DYNC1LI2O43237 492 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 ADCY6O43306 1168 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 CPT1AP50416 773 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 ZNF543Q08ER8 600 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 ITGA7Q13683 1181 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 DUSP28Q4G0W2 176 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 RNF207Q6ZRF8 634 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 FBXO16Q8IX29 292 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 DNERQ8NFT8 737 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-204ENST00000376643 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
HDAC6-204ENST00000376643 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-204ENST00000376643 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-204ENST00000376643 CTAGE5O15320 804 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 SMPD1P17405 629 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 SLC16A2P36021 539 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 SNAP25P60880 206 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 HAND2P61296 217 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 NUCB1Q02818 461 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 BAATQ14032 418 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-204ENST00000376643 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 SLC43A3Q8NBI5 491 aa17.3■□□□□ 0.36
HDAC6-204ENST00000376643 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-204ENST00000376643 MCM3APO60318 1980 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 KPNA6O60684 536 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 CD4P01730 458 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 SNHG28P0DPA3 235 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 FOSL2P15408 326 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 BEX3Q00994 111 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms