RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 RAD9BQ6WBX8 426 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 PANX2Q96RD6 677 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 TAF1DQ9H5J8 278 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 BMP6P22004 513 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 CYP2D6P10635 497 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 SLC35F6Q8N357 371 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 CPLX3Q8WVH0 158 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 CLIC6Q96NY7 704 aa16.9■□□□□ 0.3
CCHCR1-201ENST00000376266 WDR90Q96KV7 1748 aa16.89■□□□□ 0.3
CCHCR1-201ENST00000376266 ERLIN2O94905 339 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 EAPPQ56P03 285 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 PPFIBP1Q86W92 1011 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 PPP6R2O75170 966 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 ZNF18P17022 549 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 WHAMMP3Q1A5X7 153 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 RESP18Q5W5W9 173 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 HOOK1Q9UJC3 728 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-201ENST00000376266 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 GOLGA8BA8MQT2 603 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 SYF2O95926 243 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 LIG3P49916 1009 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 PLCD1P51178 756 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 FMR1Q06787 632 aaKnown RBP eCLIP16.88■□□□□ 0.296e-7■■□□□ 13.9
CCHCR1-201ENST00000376266 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 NAPGQ99747 312 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 NAA15Q9BXJ9 866 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 KCNH3Q9ULD8 1083 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 SCN4AP35499 1836 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 CNTNAP1P78357 1384 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 ZNF213O14771 459 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 FOXN1O15353 648 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 MNAT1P51948 309 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 NR1I3Q14994 352 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 ZSCAN29Q8IWY8 852 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 NOA1Q8NC60 698 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 CXorf56Q9H5V9 222 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
CCHCR1-201ENST00000376266 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 CTDSPL2Q05D32 466 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 SH3BP5LQ7L8J4 393 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 VIPAS39Q9H9C1 493 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 DDTLA6NHG4 134 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 ENTPD3O75355 529 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 GSCP56915 257 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 PPARAQ07869 468 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 RBL2Q08999 1139 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 RASA3Q14644 834 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 WDR93Q6P2C0 686 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 ENOX1Q8TC92 643 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 DACH1Q9UI36 760 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 MAN1B1Q9UKM7 699 aa16.87■□□□□ 0.29
CCHCR1-201ENST00000376266 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 PRPF6O94906 941 aaKnown RBP16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 RASGRP2Q7LDG7 609 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 CCDC148Q8NFR7 591 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 FAM237AA0A1B0GTK4 181 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 SLURP2P0DP57 97 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 MAP2K2P36507 400 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 FAM151AQ8WW52 585 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
CCHCR1-201ENST00000376266 TEX33O43247 280 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 CCDC172P0C7W6 258 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 PTPAQ15257 358 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 FAM83AQ86UY5 434 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 MLKLQ8NB16 471 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 KAT2BQ92831 832 aa16.85■□□□□ 0.29
CCHCR1-201ENST00000376266 MYH1P12882 1939 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms