RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 IQSEC1Q6DN90 963 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 MYLIPQ8WY64 445 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 AP5M1Q9H0R1 490 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 CYP39A1Q9NYL5 469 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 GNEQ9Y223 722 aaKnown RBP27.42■■□□□ 1.98
C9orf47-202ENST00000375850 ICAM1P05362 532 aa27.41■■□□□ 1.98
C9orf47-202ENST00000375850 ANKRD45Q5TZF3 282 aa27.41■■□□□ 1.98
C9orf47-202ENST00000375850 PSRC1Q6PGN9 363 aaPredicted RBP27.41■■□□□ 1.98
C9orf47-202ENST00000375850 TLK2Q86UE8 772 aa27.41■■□□□ 1.98
C9orf47-202ENST00000375850 COL25A1Q9BXS0 654 aaPredicted RBP27.41■■□□□ 1.98
C9orf47-202ENST00000375850 CCPG1Q9ULG6 757 aa27.41■■□□□ 1.98
C9orf47-202ENST00000375850 DNAJB2P25686 324 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 FSCN1Q16658 493 aaKnown RBP27.4■■□□□ 1.98
C9orf47-202ENST00000375850 BTNL9Q6UXG8 535 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 SLC43A3Q8NBI5 491 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.4■■□□□ 1.98
C9orf47-202ENST00000375850 VTA1Q9NP79 307 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 TCP11L1Q9NUJ3 509 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 ADD3Q9UEY8 706 aaKnown RBP27.4■■□□□ 1.98
C9orf47-202ENST00000375850 ZMYM6O95789 1325 aa27.4■■□□□ 1.98
C9orf47-202ENST00000375850 PCP11498 1178 aaKnown RBP27.39■■□□□ 1.98
C9orf47-202ENST00000375850 RRP1P56182 461 aaKnown RBP27.39■■□□□ 1.98
C9orf47-202ENST00000375850 IRX5P78411 483 aaPredicted RBP27.39■■□□□ 1.98
C9orf47-202ENST00000375850 CCDC96Q2M329 555 aa27.39■■□□□ 1.98
C9orf47-202ENST00000375850 MORC4Q8TE76 937 aa27.39■■□□□ 1.98
C9orf47-202ENST00000375850 RANBP17Q9H2T7 1088 aaKnown RBP27.39■■□□□ 1.98
C9orf47-202ENST00000375850 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.38■■□□□ 1.97
C9orf47-202ENST00000375850 NMT2O60551 498 aa27.38■■□□□ 1.97
C9orf47-202ENST00000375850 CD4P01730 458 aa27.38■■□□□ 1.97
C9orf47-202ENST00000375850 TOP1P11387 765 aaKnown RBP27.38■■□□□ 1.97
C9orf47-202ENST00000375850 PDE1AP54750 535 aa27.38■■□□□ 1.97
C9orf47-202ENST00000375850 VPS53Q5VIR6 699 aa27.38■■□□□ 1.97
C9orf47-202ENST00000375850 MTIF3Q9H2K0 278 aaKnown RBP27.38■■□□□ 1.97
C9orf47-202ENST00000375850 BEX3Q00994 111 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 HDAC1Q13547 482 aaPredicted RBP27.37■■□□□ 1.97
C9orf47-202ENST00000375850 MCMDC2Q4G0Z9 681 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 MUM1L1Q5H9M0 696 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 TMEM240Q5SV17 173 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 RASIP1Q5U651 963 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 CXCL17Q6UXB2 119 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 NSMFQ6X4W1 530 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 TOMM22Q9NS69 142 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 ASTN1O14525 1302 aa27.37■■□□□ 1.97
C9orf47-202ENST00000375850 UNC80Q8N2C7 3258 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 CSF2RAP15509 400 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 SMPD1P17405 629 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 NT5C2P49902 561 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 ITGA7Q13683 1181 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 SYDE2Q5VT97 1194 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 TIFAQ96CG3 184 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 INCENPQ9NQS7 918 aa27.36■■□□□ 1.97
C9orf47-202ENST00000375850 DYNC1LI2O43237 492 aaPredicted RBP27.35■■□□□ 1.97
C9orf47-202ENST00000375850 FGAP02671 866 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 AAMPQ13685 434 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 TAPT1Q6NXT6 567 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 C16orf59Q7L2K0 433 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 TTC14Q96N46 770 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 PPP1R12CQ9BZL4 782 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 ZNF576Q9H609 170 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 IL23AQ9NPF7 189 aa27.35■■□□□ 1.97
C9orf47-202ENST00000375850 CHMP4CQ96CF2 233 aa27.34■■□□□ 1.97
C9orf47-202ENST00000375850 MPHOSPH6Q99547 160 aaKnown RBP27.34■■□□□ 1.97
C9orf47-202ENST00000375850 HIPK3Q9H422 1215 aa27.34■■□□□ 1.97
C9orf47-202ENST00000375850 MTMR7Q9Y216 660 aa27.34■■□□□ 1.97
C9orf47-202ENST00000375850 MCM3APO60318 1980 aa27.34■■□□□ 1.97
C9orf47-202ENST00000375850 MFAP1P55081 439 aaKnown RBP27.33■■□□□ 1.97
C9orf47-202ENST00000375850 SNAP25P60880 206 aa27.33■■□□□ 1.97
C9orf47-202ENST00000375850 DUSP28Q4G0W2 176 aa27.33■■□□□ 1.97
C9orf47-202ENST00000375850 KIAA1211Q6ZU35 1233 aa27.33■■□□□ 1.97
C9orf47-202ENST00000375850 FBXO16Q8IX29 292 aaPredicted RBP27.33■■□□□ 1.97
C9orf47-202ENST00000375850 TMEM47Q9BQJ4 181 aa27.33■■□□□ 1.97
C9orf47-202ENST00000375850 GRIN2CQ14957 1233 aa27.32■■□□□ 1.96
C9orf47-202ENST00000375850 RAB30Q15771 203 aa27.32■■□□□ 1.96
C9orf47-202ENST00000375850 RRP12Q5JTH9 1297 aaKnown RBP27.32■■□□□ 1.96
C9orf47-202ENST00000375850 ZNF365Q70YC5 407 aa27.32■■□□□ 1.96
C9orf47-202ENST00000375850 HERVK_113Q902F9 699 aa27.32■■□□□ 1.96
C9orf47-202ENST00000375850 SYMPKQ92797 1274 aaKnown RBP27.32■■□□□ 1.96
C9orf47-202ENST00000375850 RNF41Q9H4P4 317 aaPredicted RBP27.32■■□□□ 1.96
C9orf47-202ENST00000375850 PDGFCQ9NRA1 345 aa27.32■■□□□ 1.96
C9orf47-202ENST00000375850 HSPD1P10809 573 aaKnown RBP27.31■■□□□ 1.96
C9orf47-202ENST00000375850 ALDH5A1P51649 535 aaPredicted RBP27.31■■□□□ 1.96
C9orf47-202ENST00000375850 BAATQ14032 418 aaPredicted RBP27.31■■□□□ 1.96
C9orf47-202ENST00000375850 EEPD1Q7L9B9 569 aa27.31■■□□□ 1.96
C9orf47-202ENST00000375850 RASGRP2Q7LDG7 609 aa27.31■■□□□ 1.96
C9orf47-202ENST00000375850 FAM227BQ96M60 508 aa27.31■■□□□ 1.96
C9orf47-202ENST00000375850 POLR3EQ9NVU0 708 aa27.31■■□□□ 1.96
C9orf47-202ENST00000375850 A0A0D9SFI3 127 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 FGBP02675 491 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 CYP2C18P33260 490 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 SLC16A2P36021 539 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 CPT1AP50416 773 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 TTBK2Q6IQ55 1244 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 MFSD6Q6ZSS7 791 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 PBX4Q9BYU1 374 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 MAF1Q9H063 256 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 WDR19Q8NEZ3 1342 aa27.3■■□□□ 1.96
C9orf47-202ENST00000375850 B4DLN1 442 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 SUPT20HL2P0C7V6 817 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 PDHBP11177 359 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 MRPL12P52815 198 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms