RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PRPF6O94906 941 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 KIAA1328Q86T90 577 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 ZNF507Q8TCN5 953 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 COL24A1Q17RW2 1714 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 B4DLN1 442 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 EIF3CLB5ME19 914 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 CYP27A1Q02318 531 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 TSR1Q2NL82 804 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 PAPD7Q5XG87 772 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 JAKMIP2Q96AA8 810 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 EIF3CQ99613 913 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 RMND1Q9NWS8 449 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 CAPN11Q9UMQ6 739 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 USP17L12C9JPN9 530 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 USP17L21D6R901 530 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 SCG2P13521 617 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 GGCXP38435 758 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 C4orf32Q8N8J7 132 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
CLCNKA-202ENST00000375692 MMP10P09238 476 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 KLRK1P26718 216 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 STIM1Q13586 685 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 GOLGA6L1Q8N7Z2 621 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 TRIM47Q96LD4 638 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 VIPAS39Q9H9C1 493 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 MACROD2A1Z1Q3 448 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 MRPS25P82663 173 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 CTR9Q6PD62 1173 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 RASSF8Q8NHQ8 419 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 CAGE1Q8TC20 777 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 COG1Q8WTW3 980 aa15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 GPKOWQ92917 476 aaPredicted RBP eCLIP15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 MKRN1Q9UHC7 482 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-202ENST00000375692 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 BAZ2AQ9UIF9 1905 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 C2orf54Q08AI8 447 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 SLC4A8Q2Y0W8 1093 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 NLGN1Q8N2Q7 840 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 NKRFO15226 690 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 CALM1P0DP23 149 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 CALM2P0DP24 149 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 CALM3P0DP25 149 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 NOP2P46087 812 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 NHEJ1Q9H9Q4 299 aaPredicted RBP15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
CLCNKA-202ENST00000375692 LRP5O75197 1615 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 LAMB2P55268 1798 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 PDS5AQ29RF7 1337 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 A0A1W2PQC6 194 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 AGPSO00116 658 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 DDAH1O94760 285 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 GPIHBP1Q8IV16 184 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 SMCR8Q8TEV9 937 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 SELENOOQ9BVL4 669 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 KRT86O43790 486 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 KLRC4O43908 158 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 LONP1P36776 959 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 TRAPPC10P48553 1259 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 KRT83P78385 493 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 MAP9Q49MG5 647 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 TMEM60Q9H2L4 133 aa15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 MAGEC2Q9UBF1 373 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-202ENST00000375692 ARAP2Q8WZ64 1704 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 CYP2D6P10635 497 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 IDEP14735 1019 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 EEF1GP26641 437 aaKnown RBP15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 MAGEA9P43362 315 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 TUBGCP2Q9BSJ2 902 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 CRACR2AQ9BSW2 395 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 CASZ1Q86V15 1759 aa15.77■□□□□ 0.12
CLCNKA-202ENST00000375692 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 TBC1D8BQ0IIM8 1120 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 MEA1Q16626 185 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 TTI2Q6NXR4 508 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 TXNRD3Q86VQ6 643 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 DUSP9Q99956 384 aaKnown RBP15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 RABEP2Q9H5N1 569 aa15.77■□□□□ 0.11
CLCNKA-202ENST00000375692 TARSL2A2RTX5 802 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 PPFIA4O75335 1185 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms