RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 ARHGAP27Q6ZUM4 889 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 ATG4DQ86TL0 474 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 FMNL3Q8IVF7 1028 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 RPUSD2Q8IZ73 545 aaKnown RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 STK11IPQ8N1F8 1099 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 BCL7CQ8WUZ0 217 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 PMEPA1Q969W9 287 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 MISP3Q96FF7 219 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 RNF181Q9P0P0 153 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 STIM2Q9P246 746 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 ZC3H7BQ9UGR2 993 aaKnown RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 MAP2P11137 1827 aaKnown RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 ADGRB1O14514 1584 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 BDNFP23560 247 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 BMP8BP34820 402 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF76P36508 570 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 NLRP12P59046 1061 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 FANCCQ00597 558 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 TAGLNQ01995 201 aaKnown RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 CYP27A1Q02318 531 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 SOX4Q06945 474 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 GLYCTKQ8IVS8 523 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 SAMD3Q8N6K7 520 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 GLIS3Q8NEA6 775 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 FLCNQ8NFG4 579 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 CXorf38Q8TB03 319 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 TMEM40Q8WWA1 233 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 PPM1EQ8WY54 764 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 BSNDQ8WZ55 320 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 CEP89Q96ST8 783 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 ACSS3Q9H6R3 686 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 MRS2Q9HD23 443 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 RAPGEFL1Q9UHV5 662 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 SCINQ9Y6U3 715 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 CLSPNQ9HAW4 1339 aa2.88□□□□□ -1.95
CCDC7-204ENST00000375025 CPSF1Q10570 1443 aaKnown RBP2.88□□□□□ -1.95
CCDC7-204ENST00000375025 FER1L6Q2WGJ9 1857 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ZBTB39O15060 712 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 CAND2O75155 1236 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 POU5F1Q01860 360 aaKnown RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 LDLRAD1Q5T700 205 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 NUTM2GQ5VZR2 741 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 FBXO46Q6PJ61 603 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 PNMA8AQ86V59 439 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 NCAPG2Q86XI2 1143 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 TP53INP2Q8IXH6 220 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 GPR101Q96P66 508 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 YIPF2Q9BWQ6 316 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF700Q9H0M5 742 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 KDM3BQ7LBC6 1761 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 H3BRB1 525 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 BIN1O00499 593 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ACPPP15309 386 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 FUT4P22083 530 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 DNAJA1P31689 397 aaKnown RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 MESP2Q0VG99 397 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 MAPRE1Q15691 268 aaKnown RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ARSHQ5FYA8 562 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 TMC4Q7Z404 712 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF654Q8IZM8 581 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 JDP2Q8WYK2 163 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 TUT1Q9H6E5 874 aaKnown RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 CCDC87Q9NVE4 849 aa2.87□□□□□ -1.95
CCDC7-204ENST00000375025 G3BP2Q9UN86 482 aaKnown RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF646O15015 1829 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-204ENST00000375025 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 FAM177BA6PVY3 158 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF500O60304 480 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 PRPF40AO75400 957 aaKnown RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 FARP2O94887 1054 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ESRRAP11474 423 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 CD53P19397 219 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 NOGQ13253 232 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 GLIPR1L2Q4G1C9 344 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 MAP3K19Q56UN5 1328 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 DALRD3Q5D0E6 543 aaKnown RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 AKAP4Q5JQC9 854 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 AXDND1Q5T1B0 1012 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 CCDC174Q6PII3 467 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 CKAP2LQ8IYA6 745 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 GPR152Q8TDT2 470 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 PRIMPOLQ96LW4 560 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 TAF1DQ9H5J8 278 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 C1GALT1Q9NS00 363 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 PLEKHH1Q9ULM0 1364 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 MRPL42Q9Y6G3 142 aaKnown RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 DOT1LQ8TEK3 1739 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 NFAT5O94916 1531 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 CFAP69A5D8W1 941 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 FAM170BA6NMN3 283 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 NRDCO43847 1150 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ADH5P11766 374 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 MAP7Q14244 749 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 DHX8Q14562 1220 aaKnown RBP2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF792Q3KQV3 632 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms