RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TBC1D31Q96DN5 1066 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 STK38LQ9Y2H1 464 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 H7C1D1 291 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 HOMER3Q9NSC5 361 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 KCNJ14Q9UNX9 436 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 BCRP11274 1271 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 PNOCQ13519 176 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 MUM1Q2TAK8 710 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 CCDC170Q8IYT3 715 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 TACO1Q9BSH4 297 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 CAPS2Q9BXY5 557 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 KLHL14Q9P2G3 628 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 HYOU1Q9Y4L1 999 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 DCCP43146 1447 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 CCDC169A6NNP5 214 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 HIP1RO75146 1068 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 ADCK5Q3MIX3 580 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 PPP2R2CQ9Y2T4 447 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 ITSN1Q15811 1721 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 TCHHQ07283 1943 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 SLC8A1P32418 973 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 GCKP35557 465 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 SLC8A3P57103 927 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 MYSM1Q5VVJ2 828 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 FAM71BQ8TC56 605 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 MRFAP1L1Q96HT8 127 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
NPLOC4-202ENST00000374747 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 GUCY2FP51841 1108 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 P3H4Q92791 437 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 FAM207AQ9NSI2 230 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 CHMP2AO43633 222 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SCNN1DP51172 638 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.257e-8■■■□□ 18.2
NPLOC4-202ENST00000374747 VPS72Q15906 364 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 CC2D2BQ6DHV5 1058 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 ANKRD42Q8N9B4 389 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 BCAS4Q8TDM0 211 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 ARHGEF35A5YM69 484 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 NBPF26B4DH59 902 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 GIPC1O14908 333 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 NPR1P16066 1061 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SP4Q02446 784 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 NBPF10Q6P3W6 841 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 NBPF15Q8N660 670 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 MGARPQ8TDB4 240 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 AMFRQ9UKV5 643 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 IRX4P78413 519 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 MAP3K21Q5TCX8 1036 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 DYMQ7RTS9 669 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 REXO1Q8N1G1 1221 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 OSBP2Q969R2 916 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 DCUN1D2Q6PH85 259 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 CABP7Q86V35 215 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 LRRC8AQ8IWT6 810 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 MYCBPQ99417 103 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 MTMR6Q9Y217 621 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
NPLOC4-202ENST00000374747 SH2D4BQ5SQS7 431 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 ZBED4O75132 1171 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 LRMPQ12912 555 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 CHURC1Q8WUH1 139 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 DESI2Q9BSY9 194 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 USTQ9Y2C2 406 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 PFKFB1P16118 471 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 RILPQ96NA2 401 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 FER1L4A9Z1Z3 1794 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 GNA14O95837 355 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 GPIHBP1Q8IV16 184 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 BLZF1Q9H2G9 400 aa13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-202ENST00000374747 EXOC3O60645 756 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms