RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 CARD6Q9BX69 1037 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 KCNJ18B7U540 433 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 hCG_1984214I3L0E3 225 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 KIF5CO60282 957 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 RASA1P20936 1047 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 UBA7P41226 1012 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 KCNJ12Q14500 433 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 TCP11X2Q5H9J9 407 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 C16orf86Q6ZW13 317 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 ZNF713Q8N859 430 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 RASSF8Q8NHQ8 419 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 NEDD1Q8NHV4 660 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 MTRQ99707 1265 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 RTFDC1Q9BY42 306 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 EEF1GP26641 437 aaKnown RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 GNA11P29992 359 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 HOXA7P31268 230 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 PPP2R3AQ06190 1150 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 SOGA3Q5TF21 947 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 JAKMIP3Q5VZ66 844 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 ADSSL1Q8N142 457 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 STAG2Q8N3U4 1231 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 GPR161Q8N6U8 529 aaKnown RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 EYA3Q99504 573 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 ZC3H12CQ9C0D7 883 aaKnown RBP15.68■□□□□ 0.1
HMGCL-203ENST00000374490 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 MYO1AQ9UBC5 1043 aa15.68■□□□□ 0.1
HMGCL-203ENST00000374490 SOWAHDA6NJG2 315 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 GYPCP04921 128 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
HMGCL-203ENST00000374490 CASP14P31944 242 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 CLCN6P51797 869 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 NONOQ15233 471 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGCL-203ENST00000374490 CYP26C1Q6V0L0 522 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 RAD9BQ6WBX8 426 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 RABGGTAQ92696 567 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 FAM163AQ96GL9 167 aaPredicted RBP15.67■□□□□ 0.1
HMGCL-203ENST00000374490 WDR24Q96S15 920 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
HMGCL-203ENST00000374490 A0A1W2PQC6 194 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 ESYT2A0FGR8 921 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 USP17L3A6NCW0 530 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 USP17L4A6NCW7 530 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 G3V3G9 751 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 PSMA7O14818 248 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 RIMBP2O15034 1052 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 RHOBTB3O94955 611 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 OR52Z1P0C646 297 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 BTDP43251 543 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
HMGCL-203ENST00000374490 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 USP17L1Q7RTZ2 530 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 TEX11Q8IYF3 940 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 LRRN4CLQ8ND94 238 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 STAMQ92783 540 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
HMGCL-203ENST00000374490 DHTKD1Q96HY7 919 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-203ENST00000374490 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 KBTBD4Q9NVX7 518 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 MAGEC2Q9UBF1 373 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-203ENST00000374490 LTBP3Q9NS15 1303 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
HMGCL-203ENST00000374490 KLRF2D3W0D1 207 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 FANCGO15287 622 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 CCT6AP40227 531 aaKnown RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 PRCPP42785 496 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 CDK8P49336 464 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 NAPAP54920 295 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 INF2Q27J81 1249 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 MAPKAPK5Q8IW41 473 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 CEP112Q8N8E3 955 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 MRPL44Q9H9J2 332 aaKnown RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 ABHD10Q9NUJ1 306 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 DDX60LQ5H9U9 1706 aaKnown RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 BICDL2A1A5D9 508 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 LGALS16A8MUM7 142 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms